information on T3E15
(19289..20017)
Direction: +
Frame: 2
ORF
19163..20017 (Met: 19181 19334 19466 19751 19790 19922 19352 19420 19446 19586 19624 19662)
SFGIQDMDIDEETEAETPPRVNYTSQLSKLKRTFDHKKRSTEGLVQTEDPTEDDWYEMRK
KIK*KQSHRGIIFKGDEAERSTVDV*KESINFQ*IDPEKMETALAIKEDEDFSTEWFAQE
DQKGVHLEKRSLESKLLSE*NPYSDLFSRSA*RPPTPLLKKNT*INSAAEELLELWVGYK
AQEDTIGKLTHKMEELNSTILELQEMVKGYPSFEIEDWSKEPGLEEEDYSVDQKEAYFEE
KSNEYSSYHMSREDAKYDSGTENSTIENEDFSVPLFNLFSD
GenBank annotation
None
BLASTX cluster
10572..22307 cluster 6 44 hits for protein gene
BLASTN cluster
None
GENSCAN
19181..20017 gene model 8
Grail
19181..19326 exon Phase: 0 Score: 79
19415..19580 exon Phase: 0 Score: 86
19617..20020 exon Phase: 1 Score: 74
Exon-Intron boundary candidatates
| Acceptor |
| 19178 [0.162] (0) |
19246 [0.002] (2) |
19363 [0.002] (2) |
19387 [0.003] (2) |
| 19446 [0.041] (1) |
19461 [0.068] (1) |
19512 [0.013] (1) |
19530 [0.001] (1) |
| 19589 [0.206] (0) |
19617 [0.291] (1) |
19716 [0.001] (1) |
19721 [0.005] (0) |
| 19800 [0.001] (1) |
19893 [0.001] (1) |
19930 [0.001] (2) |
19953 [0.018] (1) |
| Donor |
| 19290 [0.298] (2) |
19326 [0.344] (2) |
19515 [0.004] (2) |
19580 [0.005] (1) |
| 19941 [0.038] (2) |
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