information on T3E15    (18519..18800)

Direction: +

Frame: 3

ORF

    18153..18863  (Met: 18186 18531 18715 18727 18751 18699 18707 18796)
VHYITDEEHFQMQEVGNDQTEQLCYIQNQGGLNKGYNNYKPNPNFSYISTNVANPQDQVY
PPQENQSKLFVQYNQGYVPKQQFNGGYQQQNPPPAFTQQPQQALAAQDPEIKQLIQQIIQ
GQATGAMAFDKKIAELHNKIVCFYNDLNFNFEALNSKIKYVESQFASTSALKHPQQLPGK
AV*S*TMLLQMLSPSTKKMSLHQVIRLRILKTI*QEGGGIQLKLLHLPPINSSRL

GenBank annotation

    None

BLASTX cluster

    10572..22307    cluster 6    44 hits for protein gene

BLASTN cluster

    None

GENSCAN

    16288..18698    gene model 7

Grail

    17298..18152    exon    Phase: 0    Score: 99
    18186..18572    exon    Phase: 0    Score: 86

Exon-Intron boundary candidatates

Acceptor
18153 [0.032] (0) 18219 [0.005] (0) 18234 [0.031] (0) 18369 [0.040] (0)
18399 [0.027] (0) 18409 [0.001] (1) 18420 [0.003] (0) 18423 [0.020] (0)
18504 [0.037] (0) 18610 [0.020] (1) 18808 [0.003] (1)
Donor
18152 [0.068] (0) 18378 [0.005] (1) 18628 [0.006] (2)

[help]


Entrance