BLASTX alignment cluster 39    (117811..125454)

Local alignments in this cluster

gi|3047073[fasta] (AF058825) contains similarity to retrotransposon-like proteins [Arabidopsis thaliana]
Length 589 aa
position (link: detail on the area) subject position direction score
125024..125098 (565..589) + 79
124612..124983 (438..561) + 504
124138..124539 (313..446) + 564
123662..123898 (241..319) + 259
122514..122194 (26..132) - 548
121807..121718 (129..158) - 127
121721..121233 (157..319) - 628
120972..120571 (313..446) - 572
120492..120253 (440..519) - 322
120248..120126 (521..561) - 184
120058..120011 (574..589) - 82
99089..99175 (506..534) + 59
43915..44280 (323..444) + 273
42042..41671 (321..444) - 222
34667..34783 (264..302) + 68
33840..33965 (89..130) + 69
33678..33749 (34..57) + 57
19175..19546 (438..561) + 534
18968..19096 (313..355) + 168
18288..18692 (179..313) + 459
18139..18228 (130..159) + 122
17364..17750 (4..132) + 140
15634..15227 (1..136) - 548
14854..14759 (129..160) - 149
14705..14598 (178..213) - 193
14516..14280 (241..319) - 266
14039..13977 (313..333) - 80
13989..13648 (333..446) - 471
13576..13163 (438..575) - 548
13173..13090 (562..589) - 81

gi|3695396[fasta] (AF096372) contains similarity to Arabidopsis thaliana retrotransposon Athila (GB:X81801) [Arabidopsis thaliana]
Length 489 aa
position (link: detail on the area) subject position direction score
124729..125454 (248..489) + 799
124252..124374 (210..250) + 177
124087..124200 (177..214) + 153
123997..124098 (142..175) + 151
123662..124000 (30..142) + 456
121532..121116 (9..147) - 597
121131..120910 (141..214) - 318
120858..120736 (210..250) - 163
120381..120253 (248..290) - 189
120251..119655 (291..489) - 757
19289..20017 (247..489) + 1005
18803..19030 (139..214) + 313
18474..18812 (30..142) + 102
14516..14079 (30..175) - 617
14090..13989 (177..210) - 152
13935..13813 (210..250) - 185
13459..12734 (248..489) - 966

gi|4309767|gb|AAD15536|[fasta] (AC006217) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 1012 aa
position (link: detail on the area) subject position direction score
125086..125403 (682..787) + 174
124432..124635 (592..659) + 175
124150..124272 (556..596) + 150
123707..123913 (367..435) + 209
122514..122068 (13..161) - 674
122021..121695 (174..282) - 368
121658..121602 (296..314) - 79
121538..121218 (329..435) - 294
120960..120838 (556..596) - 150
120678..120505 (592..649) - 174
119999..119706 (690..787) - 272
118546..118217 (903..1012) - 370
44182..44280 (593..625) + 96
43915..44019 (562..596) + 100
43156..42998 (109..161) - 114
42042..41929 (560..597) - 85
41766..41668 (594..626) - 107
34667..34783 (375..413) + 63
34149..34274 (176..217) + 81
33840..34097 (76..161) + 169
21044..21289 (910..991) + 146
19625..19972 (674..789) + 299
19076..19132 (619..637) + 59
18980..19069 (556..585) + 105
18519..18725 (367..435) + 197
18339..18401 (316..336) + 64
18288..18356 (297..319) + 86
17922..18230 (174..276) + 309
17415..17876 (8..161) + 176
15574..15290 (8..102) - 417
15305..15114 (98..161) - 288
15068..14760 (174..276) - 353
14705..14634 (296..319) - 98
14651..14598 (316..333) - 63
14471..14265 (367..435) - 226
13989..13915 (572..596) - 82
13755..13609 (592..640) - 151
13102..12788 (682..786) - 262
11647..11396 (910..993) - 137

gi|2129618|pir||S66306[fasta] hypothetical protein 1 - Arabidopsis thaliana retrotransposon Athila
gi|806535|emb|CAA57397| (X81801) Athila ORF 1 [Arabidopsis thaliana]
Length 935 aa
position (link: detail on the area) subject position direction score
124747..124872 (823..864) + 67
124153..124632 (637..796) + 483
123707..124000 (418..515) + 202
122807..122917 (793..829) + 61
122514..122047 (50..205) - 694
122096..121602 (189..353) - 488
121565..121131 (371..515) - 367
121050..120541 (606..775) - 489
119999..119874 (823..864) - 42
119828..119724 (882..916) - 116
119726..119658 (912..934) - 48
94957..95262 (93..194) + 77
43915..44280 (642..763) + 321
43180..42788 (138..268) - 199
42042..41668 (640..764) - 312
33840..34274 (113..257) + 301
33669..33749 (55..81) + 64
19847..19948 (883..916) + 103
19310..19513 (823..890) + 82
19067..19132 (754..775) + 61
18890..19069 (606..665) + 127
18519..18812 (418..515) + 205
18378..18413 (371..382) + 60
17403..18350 (41..356) + 965
15724..15677 (11..26) - 53
15586..15245 (41..154) - 407
15305..14640 (135..356) - 795
14651..14613 (356..368) - 59
14471..14169 (418..518) - 235
13989..13579 (652..788) - 402
13441..13238 (823..890) - 85
12907..12803 (882..916) - 115

gi|4325357|gb|AAD17354|[fasta] (AF128395) contains similarity to Arabidopsis thaliana retrotransposon Athila hypothetical protein 1 (GB:X81801) [Arabidopsis thaliana]
Length 446 aa
position (link: detail on the area) subject position direction score
124087..124671 (252..446) + 780
123994..124098 (216..250) + 163
122514..122047 (26..181) - 747
122060..121944 (177..215) - 151
121128..120439 (217..446) - 944
43915..44280 (279..400) + 319
43222..42884 (100..212) - 142
42042..41671 (277..400) - 262
33840..34190 (89..205) + 220
19073..19234 (393..446) + 132
18812..19069 (217..302) + 383
17364..17999 (4..215) + 91
15634..15290 (1..115) - 539
15305..14991 (111..215) - 493
14186..14070 (215..253) - 178
14090..13977 (252..289) - 143
13989..13615 (289..413) - 537
13621..13517 (412..446) - 93

gi|4388721|gb|AAD19759|[fasta] (AC006413) putative Athila retroelement ORF 1 protein [Arabidopsis thaliana]
Length 750 aa
position (link: detail on the area) subject position direction score
124153..124611 (598..750) + 450
123788..124000 (406..476) + 120
122517..122047 (17..173) - 680
122096..121584 (157..327) - 497
121571..121368 (336..403) - 188
121343..121188 (406..457) - 131
121050..120520 (567..743) - 478
95080..95262 (102..162) + 68
43915..44280 (603..724) + 315
43180..42788 (106..236) - 179
42042..41668 (601..725) - 297
33840..34274 (81..225) + 273
18890..19069 (567..626) + 124
18597..18830 (405..482) + 124
18372..18413 (336..349) + 60
17403..18344 (9..322) + 59
15586..15287 (9..108) - 380
15305..14631 (103..327) - 795
14390..14169 (406..479) - 141
13989..13579 (613..749) - 374

gi|4263543|gb|AAD15357|[fasta] (AC006250) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 929 aa
position (link: detail on the area) subject position direction score
124756..124848 (810..840) + 67
124219..124623 (586..720) + 445
123707..123961 (391..475) + 189
122514..122047 (50..205) - 677
122045..121701 (206..320) - 393
121565..121182 (344..471) - 344
120891..120487 (586..720) - 408
43972..44280 (588..690) + 274
43180..42788 (138..268) - 185
41979..41665 (588..692) - 287
41667..41599 (693..715) - 58
33840..34274 (113..257) + 297
19319..19453 (810..854) + 67
19067..19186 (681..720) + 92
18519..18800 (391..484) + 185
18378..18413 (344..355) + 60
17403..18230 (41..316) + 402
15586..15287 (41..140) - 396
15305..14760 (135..316) - 693
14471..14190 (391..484) - 215
13968..13609 (586..705) - 407
13432..13340 (810..840) - 80
12898..12803 (880..911) - 62

gi|3695399[fasta] (AF096372) contains similarity to Arabidopsis thaliana retrotransposon Athila (GB:X81801) [Arabidopsis thaliana]
Length 1064 aa
position (link: detail on the area) subject position direction score
124087..124548 (379..532) + 429
123878..123949 (239..262) + 75
123707..123856 (183..232) + 167
122514..122203 (18..121) - 423
121535..121275 (146..232) - 268
121262..121182 (236..262) - 94
121050..120562 (370..532) - 446
119828..119766 (580..600) - 65
118141..117920 (711..784) - 110
43915..44280 (406..527) + 313
42352..42305 (321..336) - 43
42198..42103 (350..381) - 48
42042..41668 (404..528) - 302
33840..33941 (81..114) + 73
33770..33844 (57..81) + 44
33669..33749 (23..49) + 58
22119..22295 (834..892) + 97
21439..21666 (713..788) + 144
19847..19906 (581..600) + 67
19718..19789 (536..559) + 60
18890..19060 (370..426) + 129
18681..18761 (236..262) + 87
18519..18668 (183..232) + 141
17409..17741 (11..121) + 118
15580..15233 (11..126) - 418
14471..14322 (183..232) - 165
14309..14229 (236..262) - 96
14090..13977 (379..416) - 61
13989..13639 (416..532) - 343
12907..12845 (580..600) - 76
11262..11044 (712..784) - 105
10578..10402 (834..892) - 127

gi|4263544|gb|AAD15358|[fasta] (AC006250) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 1303 aa
position (link: detail on the area) subject position direction score
124648..124782 (567..611) + 66
124087..124539 (399..549) + 428
123878..123964 (259..287) + 69
122523..122323 (47..113) - 294
122015..121839 (163..221) - 208
121895..121695 (189..255) - 121
121256..121182 (258..282) - 79
121023..120571 (399..549) - 438
119828..119724 (631..665) - 119
118528..118313 (845..916) - 126
118021..117659 (932..1052) - 169
43915..44364 (426..575) + 336
42054..41656 (420..552) - 313
34131..34274 (157..204) + 89
33678..33755 (58..83) + 63
22068..22307 (1107..1186) + 89
21736..21981 (996..1077) + 140
21553..21717 (932..986) + 78
21035..21301 (843..931) + 137
19847..19948 (632..665) + 117
19211..19345 (567..611) + 60
18890..19069 (390..449) + 134
18687..18770 (258..285) + 68
18069..18230 (196..249) + 66
17928..18104 (163..221) + 212
17776..17916 (117..163) + 69
17406..17621 (42..113) + 343
15583..15368 (42..113) - 300
15214..15074 (117..163) - 87
15062..14886 (163..221) - 211
14303..14220 (258..285) - 77
13989..13648 (436..549) - 343
12907..12803 (631..665) - 126
11635..11390 (850..931) - 127
10962..10390 (996..1186) - 233

gi|4567294|gb|AAD23706.1|AC006918_4[fasta] (AC006918) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 733 aa
position (link: detail on the area) subject position direction score
124345..124551 (508..576) + 253
123707..123913 (305..373) + 202
122514..122095 (18..157) - 591
121919..121746 (158..215) - 197
121541..121218 (266..373) - 319
120765..120559 (508..576) - 243
44092..44280 (508..570) + 182
43180..43025 (106..157) - 95
41859..41668 (508..571) - 183
41402..41166 (607..685) - 261
41166..41023 (686..733) - 161
33840..34067 (81..156) + 148
33770..33844 (57..81) + 39
33678..33749 (26..49) + 56
18519..18725 (305..373) + 190
18024..18194 (158..214) + 181
17409..17849 (11..157) + 97
15580..15245 (11..122) - 373
15305..15141 (103..157) - 245
14966..14793 (158..215) - 188
14471..14265 (305..373) - 222
13842..13636 (508..576) - 229

gi|3319360[fasta] (AF077408) contains similarity to Vicia faba retrotransposon-like gene (GB:AB007467) [Arabidopsis thaliana]
Length 1120 aa
position (link: detail on the area) subject position direction score
124123..124608 (171..332) + 453
123707..123856 (13..62) + 162
121460..121275 (1..62) - 198
121050..120526 (150..324) - 473
119825..119703 (402..442) - 60
118519..118415 (718..752) - 71
118273..117851 (763..903) - 227
43915..44280 (186..307) + 318
42198..42103 (130..161) - 42
42042..41668 (184..308) - 294
22119..22295 (945..1003) + 78
21439..21717 (809..901) + 189
21305..21460 (764..815) + 117
21035..21154 (713..752) + 67
20912..20983 (677..700) + 60
19847..19906 (402..421) + 62
19682..19789 (345..380) + 65
19067..19132 (298..319) + 61
18890..19069 (150..209) + 128
18519..18668 (13..62) + 81
14471..14322 (13..62) - 160
13989..13594 (196..327) - 375
12904..12845 (402..421) - 70
11806..11708 (668..700) - 62
11635..11537 (720..752) - 61
11394..10981 (764..901) - 251
10578..10402 (945..1003) - 109

gi|4263546|gb|AAD15360|[fasta] (AC006250) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 451 aa
position (link: detail on the area) subject position direction score
124117..124599 (272..432) + 505
123707..123913 (13..81) + 203
121460..121218 (1..81) - 246
120960..120523 (283..428) - 475
43915..44280 (289..410) + 314
42087..41668 (272..411) - 304
41667..41599 (413..435) - 53
19067..19129 (401..421) + 67
18863..19069 (244..312) + 126
18519..18725 (13..81) + 158
14471..14265 (13..81) - 223
13989..13549 (299..445) - 428

gi|3047067[fasta] (AF058825) similar to Arabidopsis thaliana retrotransposon Athila (GB:X81801) [Arabidopsis thaliana]
Length 360 aa
position (link: detail on the area) subject position direction score
124123..124602 (181..340) + 447
123878..123961 (29..56) + 82
123794..123856 (2..22) + 79
121337..121275 (2..22) - 79
121262..121182 (26..52) - 94
121050..120523 (160..335) - 472
43915..44280 (196..317) + 301
42352..42305 (111..126) - 43
42198..42103 (140..171) - 40
42042..41668 (194..318) - 288
19067..19132 (308..329) + 60
18890..19069 (160..219) + 125
18681..18770 (26..55) + 93
18606..18668 (2..22) + 192
14384..14322 (2..22) - 74
14309..14220 (26..55) - 102
13989..13618 (206..329) - 367

gi|3319352[fasta] (AF077407) No definition line found [Arabidopsis thaliana]
Length 850 aa
position (link: detail on the area) subject position direction score
124171..124527 (543..661) + 264
123713..123805 (320..350) + 61
122514..122278 (36..114) - 291
122021..121758 (120..207) - 254
121658..121608 (244..260) - 65
121451..121326 (309..350) - 76
120939..120583 (543..661) - 253
43918..44274 (543..661) + 225
42662..42528 (333..377) - 81
42033..41677 (543..661) - 184
34149..34274 (122..163) + 81
33770..33844 (75..99) + 58
18288..18338 (245..261) + 69
17922..18185 (120..207) + 254
17418..17675 (32..117) + 249
15571..15314 (32..117) - 283
15068..14805 (120..207) - 258
14705..14652 (244..261) - 81
14465..14364 (320..353) - 64
13989..13666 (552..659) - 217

gi|3377816[fasta] (AF076275) contains similarity to Arabidopsis thaliana retrotransposon Athila (GB:X81801) [Arabidopsis thaliana]
Length 940 aa
position (link: detail on the area) subject position direction score
124168..124533 (607..728) + 297
123731..123943 (364..434) + 87
122406..122047 (113..232) - 256
122045..121890 (233..284) - 87
121400..121188 (364..434) - 77
121011..120577 (584..728) - 309
57209..57274 (899..920) + 58
44758..44874 (889..927) + 105
43855..44793 (587..899) + 1240
43507..43866 (466..585) + 477
43446..43508 (445..465) + 62
43201..43269 (51..73) + 85
43222..42770 (151..301) - 280
42749..42600 (342..391) - 156
42360..42232 (476..518) - 64
42243..42094 (517..566) - 59
42120..41635 (579..740) - 357
39075..39022 (910..927) - 74
34619..34885 (348..436) + 407
33840..34439 (140..339) + 835
33752..33844 (110..140) + 133
33459..33629 (50..106) + 182
33326..33475 (1..50) + 210
17538..18053 (113..284) + 214
15451..15305 (113..161) - 108
15302..14937 (163..284) - 258
14447..14235 (364..434) - 78
13989..13666 (617..724) - 260

gi|4325348|gb|AAD17346|[fasta] (AF128394) contains similarity to phosphate transporters [Arabidopsis thaliana]
Length 531 aa
position (link: detail on the area) subject position direction score
125227..125313 (1..29) + 121
119882..119742 (1..47) - 221
118564..117833 (138..381) - 895
117473..117405 (383..405) - 65
89802..89689 (398..435) - 161
89613..89437 (465..523) - 185
21415..21717 (273..373) + 149
21275..21439 (226..280) + 113
20972..21292 (127..233) + 127
19790..19930 (1..47) + 108
12961..12821 (1..47) - 224
11719..11399 (127..233) - 131
11430..11143 (224..319) - 184
11067..10981 (345..373) - 88
10569..10441 (407..449) - 58

gi|4263541|gb|AAD15355|[fasta] (AC006250) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 277 aa
position (link: detail on the area) subject position direction score
122514..122047 (70..225) - 797
122096..121890 (209..277) - 246
43180..42821 (158..277) - 173
33840..34274 (133..277) + 271
33785..33817 (114..124) + 36
33678..33749 (78..101) + 59
17364..18053 (48..277) + 1136
17276..17371 (19..50) + 133
17231..17293 (1..21) + 131
15757..15659 (1..33) - 86
15712..15245 (19..174) - 691
15305..14937 (155..277) - 625

gi|4309768|gb|AAD15537|[fasta] (AC006217) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 281 aa
position (link: detail on the area) subject position direction score
122514..122350 (18..72) - 230
122169..122047 (71..111) - 158
122060..121941 (107..146) - 149
121796..121608 (147..209) - 171
121655..121494 (197..250) - 123
121535..121410 (236..277) - 98
33999..34199 (72..138) + 149
18339..18413 (214..238) + 83
18147..18350 (147..214) + 125
17775..18002 (71..146) + 283
17409..17591 (11..71) + 45
15580..15395 (11..72) - 253
15215..14988 (71..146) - 315
14843..14640 (147..214) - 149
14651..14601 (214..230) - 68

gi|4417306|gb|AAD20430|[fasta] (AC006446) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 622 aa
position (link: detail on the area) subject position direction score
124165..124278 (412..449) + 122
122514..122029 (36..197) - 588
121451..121326 (203..244) - 76
120945..120832 (412..449) - 123
43915..44016 (413..446) + 94
43222..42974 (110..192) - 136
42662..42528 (227..271) - 78
42033..41935 (414..446) - 70
34778..34882 (251..285) + 65
33840..34121 (99..192) + 197
33770..33844 (75..99) + 61
17418..17909 (32..195) + 48
15571..15287 (32..126) - 305
15305..15081 (121..195) - 297
14465..14364 (214..247) - 64
13989..13909 (423..449) - 71

gi|4432810|gb|AAD20661|[fasta] (AC006570) putative pol polyprotein, 3' partial [Arabidopsis thaliana]
Length 469 aa
position (link: detail on the area) subject position direction score
124288..124620 (24..134) + 310
121880..121794 (3..31) - 129
120822..120490 (24..134) - 302
99110..99646 (273..451) + 229
44032..44280 (23..105) + 213
41916..41668 (24..106) - 230
41667..41602 (108..129) - 53
41390..41229 (224..277) - 153
18066..18149 (4..31) + 412
14933..14841 (1..31) - 132
13899..13609 (24..120) - 276

gi|4388825|gb|AAD19780|[fasta] (AC006528) putative pol polyprotein with reverse transcriptase domain (Pfam: PF00078) [Arabidopsis thaliana]
Length 841 aa
position (link: detail on the area) subject position direction score
124543..124623 (190..216) + 42
124153..124533 (61..187) + 335
120957..120577 (61..187) - 317
99296..99610 (594..698) + 107
98960..99112 (510..560) + 113
43918..44310 (67..197) + 281
42075..41602 (53..210) - 344
41408..41163 (282..363) - 233
41154..40786 (367..489) - 414
40740..40639 (729..762) - 108
40394..40287 (795..830) - 108
13989..13663 (76..184) - 284

gi|3377832[fasta] (AF075598) No definition line found [Arabidopsis thaliana]
Length 294 aa
position (link: detail on the area) subject position direction score
124168..124533 (141..262) + 296
121011..120577 (118..262) - 298
43855..44376 (121..294) + 690
43810..43866 (101..119) + 235
42120..41641 (113..272) - 356
13989..13663 (151..259) - 249

gi|4263545|gb|AAD15359|[fasta] (AC006250) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 532 aa
position (link: detail on the area) subject position direction score
124369..124551 (371..431) + 156
122490..122323 (152..207) - 107
122229..121924 (220..321) - 149
120741..120544 (371..436) - 162
70421..70290 (489..532) - 119
70228..70341 (491..528) + 64
44803..44871 (468..490) + 103
44675..44806 (424..467) + 137
44119..44280 (372..425) + 236
43156..42956 (221..287) - 159
42931..42818 (281..318) - 79
41835..41671 (371..425) - 166
39075..39025 (474..490) - 70
34143..34439 (274..372) + 329
33879..34139 (201..287) + 302
33752..33883 (177..220) + 168
33525..33749 (101..175) + 301
33209..33475 (10..98) + 357
17940..18053 (280..317) + 81
17715..17918 (220..287) + 144
17454..17621 (152..207) + 315
15535..15368 (152..207) - 117
15275..15072 (220..287) - 155
15050..14937 (280..317) - 82
13818..13636 (371..431) - 149

gi|3319361[fasta] (AF077408) contains similarity to Arabidopsis thaliana retrotransposon Athila (GB:X81801) [Arabidopsis thaliana]
Length 512 aa
position (link: detail on the area) subject position direction score
122514..122299 (18..89) - 315
121955..121758 (89..154) - 232
17988..18185 (89..154) + 221
17409..17645 (11..89) + 442
15580..15344 (11..89) - 328
15041..14805 (76..154) - 233

gi|4417310|gb|AAD20434|[fasta] (AC006446) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 507 aa
position (link: detail on the area) subject position direction score
122514..122245 (109..198) - 327
121988..121875 (225..262) - 131
121487..121326 (257..310) - 80
34778..34882 (317..351) + 65
17952..18068 (224..262) + 129
17418..17699 (105..198) + 84
15571..15233 (105..217) - 339
15038..14922 (224..262) - 128
14465..14364 (280..313) - 64

gi|4309705|gb|AAD15489|[fasta] (AC006266) putative Athila-like protein [Arabidopsis thaliana]
Length 285 aa
position (link: detail on the area) subject position direction score
124225..124533 (6..108) + 259
120885..120577 (6..108) - 246
43957..44805 (1..283) + 295
41979..41641 (6..118) - 346
13962..13663 (6..105) - 251

gi|4432809|gb|AAD20660|[fasta] (AC006570) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 169 aa
position (link: detail on the area) subject position direction score
122514..122218 (70..168) - 498
17364..17726 (48..168) + 607
17276..17371 (19..50) + 133
17231..17293 (1..21) + 449
15712..15290 (19..159) - 688
15305..15264 (155..168) - 63

gi|4263654|gb|AAD15376|[fasta] (AC006136) putative reverse transcriptase [Arabidopsis thaliana]
Length 962 aa
position (link: detail on the area) subject position direction score
124387..124533 (513..561) + 137
122490..122314 (92..150) - 134
122015..121890 (158..199) - 73
120723..120577 (513..561) - 132
45097..45210 (702..739) + 170
44803..44874 (675..698) + 92
44675..44794 (633..672) + 132
44384..44509 (593..634) + 153
44134..44415 (513..606) + 310
43855..43974 (465..504) + 150
43675..43866 (400..463) + 243
43213..43281 (24..46) + 65
42958..42770 (154..216) - 82
42752..42624 (306..348) - 85
41814..41641 (514..571) - 165
39785..39672 (883..920) - 58
39075..39016 (681..700) - 68
34826..34885 (357..376) + 108
34767..34823 (337..355) + 70
34619..34726 (313..348) + 107
34444..34614 (256..312) + 186
34128..34463 (151..262) + 390
33752..33844 (117..147) + 126
33492..33749 (30..115) + 329
33326..33400 (1..25) + 94
17943..18053 (163..199) + 78
17454..17630 (92..150) + 93
15535..15353 (92..152) - 138
15047..14937 (163..199) - 79
13800..13663 (513..558) - 122

gi|2522230|dbj|BAA22788|[fasta] (AB007467) retrotransposon-like gene; the first amino acid was determined to be leucine [Vicia faba]
Length 238 aa
position (link: detail on the area) subject position direction score
124162..124533 (74..197) + 250
121086..120577 (28..197) - 223
43918..44316 (77..209) + 174
42045..41629 (73..211) - 236
13983..13666 (88..193) - 200

gi|2522227|dbj|BAA22786|[fasta] (AB007466) retrotransposon-like gene; the first amino acid was determined to be glycine [Vicia faba]
Length 298 aa
position (link: detail on the area) subject position direction score
124186..124533 (1..116) + 253
120924..120577 (1..116) - 219
43933..44298 (1..122) + 84
42018..41629 (1..130) - 222
41351..41163 (221..283) - 118
13989..13663 (5..113) - 216

gi|3327397[fasta] (AC004483) Athila retroelement ORF1-like protein [Arabidopsis thaliana]
Length 181 aa
position (link: detail on the area) subject position direction score
122520..122401 (34..73) - 160
122325..122218 (77..112) - 132
122169..122071 (114..146) - 139
33999..34094 (115..146) + 72
33840..33956 (77..115) + 72
33678..33749 (44..67) + 55
17775..17873 (114..146) + 134
17619..17726 (77..112) + 134
17409..17543 (29..73) + 123
15580..15446 (29..73) - 196
15370..15299 (77..100) - 87
15305..15264 (99..112) - 49
15215..15117 (114..146) - 142

gi|4309867|gb|AAD15540|[fasta] (AC006527) putative Athila retroelement orf1-like protein [Arabidopsis thaliana]
Length 248 aa
position (link: detail on the area) subject position direction score
124273..124533 (45..131) + 188
120837..120577 (45..131) - 193
44803..44865 (194..214) + 62
44023..44310 (46..141) + 41
41916..41650 (50..138) - 213
13914..13654 (45..131) - 183

gi|4388724|gb|AAD19762|[fasta] (AC006413) putative Athila ORF1 protein [Arabidopsis thaliana]
Length 616 aa
position (link: detail on the area) subject position direction score
123731..123943 (384..454) + 90
122466..122017 (117..266) - 274
43855..43905 (600..616) + 69
43510..43866 (480..598) + 461
43222..42983 (175..254) - 192
42761..42600 (358..411) - 147
42360..42232 (489..531) - 65
42303..42100 (510..577) - 64
34619..34885 (368..456) + 379
34512..34613 (332..365) + 144
34359..34508 (284..333) + 169
34228..34323 (254..285) + 109
33840..34109 (164..253) + 386
33752..33844 (134..164) + 120
33510..33641 (60..103) + 181
33326..33475 (1..50) + 204
17478..17888 (117..253) + 226
15511..15314 (117..182) - 139
15320..15102 (181..253) - 145
14447..14235 (384..454) - 81

gi|4567293|gb|AAD23705.1|AC006918_3[fasta] (AC006918) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 333 aa
position (link: detail on the area) subject position direction score
123731..123946 (200..271) + 87
122145..122047 (4..36) - 86
122045..121890 (37..88) - 86
121400..121185 (200..271) - 78
43446..43511 (277..298) + 61
43309..43232 (307..332) - 65
43078..42770 (3..105) - 175
42761..42600 (174..227) - 167
34619..34879 (184..270) + 337
34503..34676 (145..202) + 137
34017..34439 (3..143) + 514
17799..18053 (4..88) + 103
15191..14937 (4..88) - 173
14447..14232 (200..271) - 78

gi|4567296|gb|AAD23708.1|AC006918_6[fasta] (AC006918) putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
Length 555 aa
position (link: detail on the area) subject position direction score
118504..118313 (71..134) - 105
118273..118127 (149..197) - 125
117811..117659 (247..297) - 82
100184..100264 (433..459) + 56
22125..22307 (368..428) + 81
21730..21981 (239..322) + 129
21305..21451 (150..198) + 130
21065..21265 (71..137) + 85
11788..11711 (22..47) - 67
11626..11426 (71..137) - 144
11394..11245 (150..199) - 143
10968..10597 (239..362) - 153
10572..10321 (368..451) - 115

gi|1666236[fasta] (U76261) unknown [Hordeum vulgare]
Length 337 aa
position (link: detail on the area) subject position direction score
122478..122065 (23..160) - 297
122003..121929 (181..205) - 38
43222..42827 (85..216) - 142
33840..34235 (74..205) + 181
17466..18014 (23..205) + 89
15523..15284 (23..102) - 165
15299..14976 (98..205) - 194

gi|4388732|gb|AAD19770|[fasta] (AC006413) putative Athila retroelement ORF 2 protein [Arabidopsis thaliana]
Length 485 aa
position (link: detail on the area) subject position direction score
118513..118430 (122..149) - 96
118276..118130 (175..223) - 116
22068..22307 (337..416) + 99
21478..21711 (221..298) + 142
21296..21427 (174..217) + 103
21035..21139 (115..149) + 65
11818..11711 (64..99) - 57
11656..11552 (115..149) - 88
11421..11266 (168..219) - 104
11220..10987 (221..298) - 120
10629..10360 (337..426) - 136

gi|4325348|gb|AAD17346|[fasta] (AF128394) contains similarity to phosphate transporters [Arabidopsis thaliana]
Length 531 aa
position (link: detail on the area) subject position direction score
125227..125313 (1..29) + 121
119882..119742 (1..47) - 221
118564..117833 (138..381) - 895
117473..117405 (383..405) - 65
89802..89689 (398..435) - 161
89613..89437 (465..523) - 185
21415..21717 (273..373) + 149
21275..21439 (226..280) + 113
20972..21292 (127..233) + 127
19790..19930 (1..47) + 108
12961..12821 (1..47) - 224
11719..11399 (127..233) - 131
11430..11143 (224..319) - 184
11067..10981 (345..373) - 88
10569..10441 (407..449) - 58

gi|4263831|gb|AAD15474|[fasta] (AC006067) putative reverse transcriptase [Arabidopsis thaliana]
Length 1466 aa
position (link: detail on the area) subject position direction score
122391..122095 (168..266) - 82
115378..115554 (732..790) + 192
115217..115378 (678..731) + 177
115147..115254 (655..690) + 115
114641..114757 (326..364) + 72
114584..114631 (309..324) + 68
101056..101544 (1102..1264) + 504
100823..100870 (1064..1079) + 64
100484..100798 (953..1057) + 331
100092..100214 (824..864) + 126
98960..99586 (582..790) + 786
98329..98424 (440..471) + 70
98150..98329 (380..439) + 89
94780..95313 (111..288) + 369
43936..44049 (426..463) + 59
40923..40789 (516..560) - 104
39652..39503 (1113..1162) - 102
33846..34067 (192..265) + 93
17553..17753 (168..234) + 137

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