information on T3E15
(80949..80530)
Direction: -
Frame: 1
ORF
80991..80416 (Met: 80961 80925 80910 80766 80727 80697 80580 80484)
YSKILIVCLCMKFQELDDEEQPMQPKRMFFSPSEYVKTCKIGTRCTVQQTVKYLEEFKED
LPWFKAHPQFRHVFHMPEEKNHKTQGLWMLLLRTAQTEMDRECWFVVNGVPIRYSIKEHA
LLCGFDCHDYPEELQPSMKIVDADLKFAKKIFKKVSGIKIVDVAKKLDEMKKCEEKKKTD
RKKLAILLFCAR
GenBank annotation
None
BLASTX cluster
82428..78804 cluster 29 6 hits for protein gene
BLASTN cluster
None
GENSCAN
83311..78774 gene model 22
Suboptimal exon
80949..80417 Intr Phase: 0 Score: 0.216
Grail
80949..80413 exon Phase: 0 Score: 89
Exon-Intron boundary candidatates
Acceptor |
80416 [0.043] (2) |
80453 [0.001] (1) |
80529 [0.007] (0) |
80708 [0.005] (1) |
80779 [0.025] (2) |
80796 [0.018] (0) |
80867 [0.001] (1) |
80899 [0.001] (2) |
80919 [0.004] (0) |
80949 [1.00N/0.692] (0) |
Donor |
80417 [0.014] (2) |
80530 [0.242] (0) |
80583 [0.018] (1) |
80654 [0.99N/0.490] (2) |
80674 [0.040] (0) |
80681 [0.371] (2) |
80837 [0.005] (2) |
80877 [0.076] (1) |
80974 [0.004] (0) |
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Entrance