information on T3E15
(59040..59842)
Direction: +
Frame: 3
ORF
59034..59861 (Met: 59151 59184 59250 59304 59412 59448 59460 59490 59529 59649 59709 59715)
NKFYDLLEGANNPLYDGYREGQSQLSLASRLVHNKAEYNMSEKLVDSVCEMFTNSLPEGN
QITTSHYQTEKLMRNLELPYHTIDVCQNNCMLFWKEDEKEDQYRFCGAQRWKPKDNRRRT
KLPYSHMWYLPIGDRLKRMYQRMYQSHKTVAAMRWHAEHQSKEGEMNHPSDAAEWRYFQE
LHPWFAEEPCNVYFGLCTDGFNRFGMSRNHSLWHVILTPYNLPPGMCMNTEYLFLTILNS
GPNHPRASLDVFLQPLIEELKELWSTGVDAYDVSLS
GenBank annotation
None
BLASTX cluster
58563..62361 cluster 21 22 hits for protein gene
BLASTN cluster
None
GENSCAN
58560..66103 gene model 17
Suboptimal exon
59040..59706 Intr Phase: 0 Score: 0.137
Grail
59056..59301 exon Phase: 1 Score: 50
59448..59842 exon Phase: 0 Score: 60
Exon-Intron boundary candidatates
| Acceptor |
| 59056 [0.001] (1) |
59059 [0.010] (1) |
59095 [0.185] (1) |
59100 [0.014] (0) |
| 59206 [0.160] (1) |
59209 [0.006] (1) |
59238 [0.006] (0) |
59295 [0.86N/0.084] (0) |
| 59320 [0.001] (1) |
59323 [0.007] (1) |
59445 [0.001] (0) |
59457 [0.011] (0) |
| 59469 [0.012] (0) |
59482 [0.003] (1) |
59545 [0.001] (1) |
59551 [0.003] (1) |
| 59725 [0.004] (1) |
| Donor |
| 59058 [0.81N/0.026] (1) |
59301 [0.008] (1) |
59416 [0.005] (2) |
59584 [0.067] (2) |
| 59601 [0.92N/0.011] (1) |
59617 [0.74N/0.006] (2) |
59706 [0.86N/0.588] (1) |
59725 [0.004] (2) |
| 59842 [0.045] (2) |
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Entrance