information on T3E15
(54299..54267)
Direction: -
Frame: 2
ORF
54632..54228 (Met: 54620 54422 54380 54314)
SAFFMCIERLTVTTGPLSGSHRVGCYTNRLADGLANYVFSLPLGFHLFEARPDVVTSIVF
EDANGYARHVMFVFKFYSFLIFNNMRGTLSPHPTKKKNYTNEILYSMFFGKIYERVSSKG
SSVRSKRQYHLDNHP
GenBank annotation
None
BLASTX cluster
54929..54601 cluster 18 1 hits for protein gene
BLASTN cluster
None
GENSCAN
57825..52648 gene model 16
Suboptimal exon
54299..54228 Term Phase: 0 Score: 0.122
Grail
54314..54225 exon Phase: 0 Score: 52
54610..54225 exon Phase: 1 Score: 82
Exon-Intron boundary candidatates
| Acceptor |
| 54299 [0.022] (0) |
54480 [0.043] (2) |
54485 [0.020] (0) |
54502 [0.047] (1) |
| 54606 [0.001] (2) |
54608 [0.002] (0) |
54610 [0.862] (1) |
| Donor |
| 54267 [0.99N/0.233] (0) |
54305 [0.007] (1) |
54421 [0.090] (2) |
54426 [0.92N/0.729] (0) |
| 54439 [0.933] (2) |
54503 [0.011] (1) |
54535 [0.92N/0.971] (2) |
54563 [0.013] (1) |
| 54567 [0.85N/0.104] (0) |
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Entrance