information on T3E15    (27339..27099)

Direction: -

Frame: 1

ORF

    27408..27043  (Met: 27339 27324 27114 27078)
LRLCVEFTAKESRDISWKDGSRGMKNQPMGSDSRVESRFEVPGGGFEGLCYDYQDDEPGD
EEAADEEVGDEEAGDEEKDDEFSSRFDVLTTPTVPHLIMITLLCTESVIFMSVYTIRSTH
VL

GenBank annotation

    None

BLASTX cluster

    28611..25932    cluster 9    25 hits for protein gene
    28611..26445    cluster 10    1 hits for protein gene

BLASTN cluster

    None

GENSCAN

    27339..25140    gene model 11
    Suboptimal exon

        27339..27189    Init    Phase: 0    Score: 0.253

Grail

    27408..27040    exon    Phase: 0    Score: 89

Exon-Intron boundary candidatates

Acceptor
27203 [0.010] (1) 27218 [0.002] (1) 27233 [0.026] (1) 27245 [0.015] (1)
27266 [0.019] (1) 27354 [0.004] (0) 27361 [0.001] (2) 27390 [0.002] (0)
27408 [0.004] (0)
Donor
27130 [0.74N] (0) 27155 [0.90N/0.084] (2) 27189 [0.666] (1) 27208 [0.004] (0)
27267 [0.036] (1) 27275 [0.006] (2)

[help]


Entrance