information on T3E15
(27339..27099)
Direction: -
Frame: 1
ORF
27408..27043 (Met: 27339 27324 27114 27078)
LRLCVEFTAKESRDISWKDGSRGMKNQPMGSDSRVESRFEVPGGGFEGLCYDYQDDEPGD
EEAADEEVGDEEAGDEEKDDEFSSRFDVLTTPTVPHLIMITLLCTESVIFMSVYTIRSTH
VL
GenBank annotation
None
BLASTX cluster
28611..25932 cluster 9 25 hits for protein gene
28611..26445 cluster 10 1 hits for protein gene
BLASTN cluster
None
GENSCAN
27339..25140 gene model 11
Suboptimal exon
27339..27189 Init Phase: 0 Score: 0.253
Grail
27408..27040 exon Phase: 0 Score: 89
Exon-Intron boundary candidatates
Acceptor |
27203 [0.010] (1) |
27218 [0.002] (1) |
27233 [0.026] (1) |
27245 [0.015] (1) |
27266 [0.019] (1) |
27354 [0.004] (0) |
27361 [0.001] (2) |
27390 [0.002] (0) |
27408 [0.004] (0) |
Donor |
27130 [0.74N] (0) |
27155 [0.90N/0.084] (2) |
27189 [0.666] (1) |
27208 [0.004] (0) |
27267 [0.036] (1) |
27275 [0.006] (2) |
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Entrance