information on T27D20
(79884..79729)
Direction: -
Frame: 2
ORF
80100..79174 (Met: 79638 79599)
ILRPERTLKVIHNLRGPSQVQTRRKRRRCLSPFRRTLERTSFGLVLKTRGKFRGQFSGAI
DALPKAIFDANRSTSDADLWSLSQQPNEPLRDFLAKFRSTLAKVEGINDVAALSALKKAL
CYKSEFRKELNLSKPQTIRDALHRASDYVSHEEEMELLSKRHEPPKQMPRSDKSQFRSPN
HKKGAQDGTFIHHEGRNFSEAHNYQADTPRGRGRGRGRGRGRESYTWTNDQPARNEQEYC
ELHKSYGHHTSRCRSLGAKLAAKFLVGEIGGGLTIGDLETEKAKTEQVYAVANPEQAAPA
ANLEGSKRG
GenBank annotation
80255..79171 T27D20.18
BLASTX cluster
80273..75168 cluster 17 61 hits for protein gene
80444..79033 cluster 18 1 hits for protein gene
BLASTN cluster
None
GENSCAN
80389..75165 gene model 16
Grail
None
Exon-Intron boundary candidatates
Acceptor |
79212 [0.009] (0) |
79239 [0.034] (0) |
79254 [0.005] (0) |
79274 [0.019] (1) |
79336 [0.009] (2) |
79345 [0.003] (2) |
79484 [0.014] (1) |
79499 [0.002] (1) |
79517 [0.001] (1) |
79570 [0.013] (2) |
79588 [0.001] (2) |
79716 [0.003] (0) |
79845 [0.028] (0) |
79848 [0.011] (0) |
79874 [0.003] (1) |
79928 [0.037] (1) |
79935 [0.002] (0) |
80103 [0.011] (0) |
Donor |
79240 [0.005] (0) |
79383 [0.056] (1) |
79862 [0.006] (2) |
79880 [0.009] (2) |
80018 [0.076] (2) |
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