information on T27D20
(71710..71345)
Direction: -
Frame: 1
ORF
71728..71126 (Met: 71710 71521 71506 71485)
LTLIRYMIGIRSFFRDLCTRTLTTDVIEQLDKNIPVLLCNLEKLFPPAFFDVIEHLPIHL
LHETALGGPMQFRWMYPFERFMKSLKEKAKNLARVEGSIVAGSLTEETSHFTSYYFSPNV
RTKKTHPRRYDDGGVAPTYNVPDVPDSFAQIGRLAEKSKEVWWDDHAISRAAHNYILRNV
DYIKKFERYKARQILFIIFYI
GenBank annotation
None
BLASTX cluster
71887..71345 cluster 16 1 hits for protein gene
BLASTN cluster
None
GENSCAN
72744..68210 gene model 14
Grail
71710..71123 exon Phase: 0 Score: 84
71829..71729 exon Phase: 1 Score: 28
Exon-Intron boundary candidatates
Acceptor |
71214 [0.003] (1) |
71262 [0.044] (1) |
71270 [0.001] (2) |
71274 [0.186] (1) |
71288 [0.001] (2) |
71292 [0.020] (1) |
71424 [0.009] (1) |
71464 [0.069] (0) |
71469 [0.001] (1) |
71489 [0.001] (2) |
71568 [0.011] (1) |
71684 [0.84N/0.581] (2) |
71696 [0.017] (2) |
71703 [0.100] (1) |
Donor |
71166 [0.81N/0.526] (2) |
71275 [0.019] (1) |
71329 [0.005] (1) |
71614 [0.003] (1) |
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