information on T27D20    (71710..71345)

Direction: -

Frame: 1

ORF

    71728..71126  (Met: 71710 71521 71506 71485)
LTLIRYMIGIRSFFRDLCTRTLTTDVIEQLDKNIPVLLCNLEKLFPPAFFDVIEHLPIHL
LHETALGGPMQFRWMYPFERFMKSLKEKAKNLARVEGSIVAGSLTEETSHFTSYYFSPNV
RTKKTHPRRYDDGGVAPTYNVPDVPDSFAQIGRLAEKSKEVWWDDHAISRAAHNYILRNV
DYIKKFERYKARQILFIIFYI

GenBank annotation

    None

BLASTX cluster

    71887..71345    cluster 16    1 hits for protein gene

BLASTN cluster

    None

GENSCAN

    72744..68210    gene model 14

Grail

    71710..71123    exon    Phase: 0    Score: 84
    71829..71729    exon    Phase: 1    Score: 28

Exon-Intron boundary candidatates

Acceptor
71214 [0.003] (1) 71262 [0.044] (1) 71270 [0.001] (2) 71274 [0.186] (1)
71288 [0.001] (2) 71292 [0.020] (1) 71424 [0.009] (1) 71464 [0.069] (0)
71469 [0.001] (1) 71489 [0.001] (2) 71568 [0.011] (1) 71684 [0.84N/0.581] (2)
71696 [0.017] (2) 71703 [0.100] (1)
Donor
71166 [0.81N/0.526] (2) 71275 [0.019] (1) 71329 [0.005] (1) 71614 [0.003] (1)

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Entrance