information on T27D20
(51521..51231)
Direction: -
Frame: 3
ORF
51608..51219 (Met: 51305)
ERQKRRVSFQGVGRTLGGSNEGSGSSSPVAPDSAPIPIQTEPAPSQSLVIDETVPTTSIQ
LRLADGTRLVAKFNHHHTVNDIRGFIDSSRPGASLNYQLQTMGFPPKPLTDLTQTIEEAG
LANSVVLQKF
GenBank annotation
52495..51216 T27D20.10
BLASTX cluster
52450..51231 cluster 9 1 hits for protein gene
BLASTN cluster
51609..51129 cluster 2 1 hits for EST
GENSCAN
52495..46943 gene model 10
Suboptimal exon
51608..51219 Term Phase: 0 Score: 0.384
Grail
51578..51216 exon Phase: 0 Score: 90
Exon-Intron boundary candidatates
| Acceptor |
| 51224 [0.002] (0) |
51314 [0.002] (0) |
51428 [0.007] (0) |
51457 [0.002] (1) |
| 51531 [0.007] (2) |
51540 [0.002] (2) |
51544 [0.043] (1) |
51552 [0.002] (2) |
| 51559 [0.090] (1) |
51567 [0.001] (2) |
51578 [0.94N/0.640] (0) |
51591 [0.005] (2) |
| 51599 [0.027] (0) |
51603 [0.001] (2) |
51608 [1.00N/0.765] (0) |
| Donor |
| 51375 [0.006] (0) |
51402 [0.004] (0) |
51465 [0.011] (0) |
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Entrance