information on T27D20
(36171..36926)
Direction: +
Frame: 3
ORF
36168..36926 (Met: 36273 36306 36453 36483 36885)
AVQEFNYAFLSHEDQLFEKDKEIESYKQNEEENARMVDRANSVLSRMRAAEAKVQTLEIS
NTDLSAKLESGKNAYPTTIENENRSRAELLACEERMKKLEEGQSVMLHAARQEEKRKVRA
QLTDFSSKYGTFYVQSDEVEAANIRAAEVKVNRELLEEIEKGEIPSIAEELESVRADEIK
FAQKAAEPKTPRPNPVEPTSLLADTPPEVIADSNASDEVLIIDKHGTNKDTAAEAGIAAM
FPVDVEKNSEAAE
GenBank annotation
35430..36929 T27D20.3
BLASTX cluster
35037..36926 cluster 6 2 hits for protein gene
BLASTN cluster
None
GENSCAN
33019..38978 gene model 8
Suboptimal exon
36168..36926 Term Phase: 0 Score: 0.885
Grail
36177..36929 exon Phase: 0 Score: 90
Exon-Intron boundary candidatates
| Acceptor |
| 36168 [0.95N/0.514] (0) |
36177 [0.322] (0) |
36200 [0.025] (2) |
36583 [0.003] (1) |
| 36588 [0.001] (0) |
36610 [0.346] (1) |
36613 [0.001] (1) |
36618 [0.029] (0) |
| 36626 [0.174] (2) |
36697 [0.025] (1) |
36720 [0.005] (0) |
36778 [0.004] (1) |
| 36802 [0.006] (1) |
36817 [0.002] (1) |
36835 [0.035] (1) |
| Donor |
| 36270 [0.005] (1) |
36293 [0.004] (0) |
36303 [0.022] (1) |
36326 [0.041] (0) |
| 36471 [0.463] (1) |
36518 [0.584] (0) |
36686 [0.006] (0) |
36791 [0.025] (0) |
| 36925 [0.74N/0.007] (2) |
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