information on T27D20
(35364..35630)
Direction: +
Frame: 3
ORF
35358..35921 (Met: 35430 35463 35520)
GRRLRSRTATSSPPFQPRIFSEAEMASSSYCAEKKMERERARKEKERLQSDKVVMAGTLE
DSKLRALDKAKQPQNEDDSGTRQKSSALSGKGPKISTSEARTSNKNTPDKEPTKRDADKK
RKHSETDARSPSRSSRAGNEAKETGQNQQKGKNKKGDSQDLVVLSSRVSESRYSQRRTTS
PLPGKLVF
GenBank annotation
35430..36929 T27D20.3
BLASTX cluster
35037..36926 cluster 6 2 hits for protein gene
BLASTN cluster
None
GENSCAN
33019..38978 gene model 8
Suboptimal exon
35430..35907 Init Phase: 0 Score: 0.969
Grail
35248..35357 exon Phase: 1 Score: 24
35430..35917 exon Phase: 0 Score: 86
Exon-Intron boundary candidatates
Acceptor |
35428 [0.018] (1) |
35463 [0.003] (0) |
35543 [0.002] (2) |
35631 [0.010] (0) |
35858 [0.073] (2) |
Donor |
35503 [0.010] (2) |
35513 [0.013] (0) |
35516 [0.021] (0) |
35601 [0.009] (1) |
35790 [0.007] (1) |
35907 [1.00N/0.988] (1) |
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Entrance