information on T27D20    (35364..35630)

Direction: +

Frame: 3

ORF

    35358..35921  (Met: 35430 35463 35520)
GRRLRSRTATSSPPFQPRIFSEAEMASSSYCAEKKMERERARKEKERLQSDKVVMAGTLE
DSKLRALDKAKQPQNEDDSGTRQKSSALSGKGPKISTSEARTSNKNTPDKEPTKRDADKK
RKHSETDARSPSRSSRAGNEAKETGQNQQKGKNKKGDSQDLVVLSSRVSESRYSQRRTTS
PLPGKLVF

GenBank annotation

    35430..36929    T27D20.3

BLASTX cluster

    35037..36926    cluster 6    2 hits for protein gene

BLASTN cluster

    None

GENSCAN

    33019..38978    gene model 8
    Suboptimal exon

        35430..35907    Init    Phase: 0    Score: 0.969

Grail

    35248..35357    exon    Phase: 1    Score: 24
    35430..35917    exon    Phase: 0    Score: 86

Exon-Intron boundary candidatates

Acceptor
35428 [0.018] (1) 35463 [0.003] (0) 35543 [0.002] (2) 35631 [0.010] (0)
35858 [0.073] (2)
Donor
35503 [0.010] (2) 35513 [0.013] (0) 35516 [0.021] (0) 35601 [0.009] (1)
35790 [0.007] (1) 35907 [1.00N/0.988] (1)

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