information on T27D20    (16203..16397)

Direction: +

Frame: 3

ORF

    16056..16526  (Met:)
AETAATDAYLINRSPASAVDHNVPEQLWLNREPGYKHLRRFSSIAYVHQEQGKLKPRVLK
GVFLGYPQGTKGYKVWLIDEEKCVISRNVVFNEDSVFKDLQSGSKDEDETVTQESQIEIE
TPPKSELETQNQVQGGATQVQLNDSEDEYNDVEGVVT

GenBank annotation

    14338..18209    T27D20.5

BLASTX cluster

    None

BLASTN cluster

    None

GENSCAN

    14338..17984    gene model 4
    Suboptimal exon

        16094..16526    Term    Phase: 2    Score: 0.538

Grail

    16069..16282    exon    Phase: 1    Score: 49
    16342..16529    exon    Phase: 1    Score: 82

Exon-Intron boundary candidatates

Acceptor
16094 [0.708] (2) 16111 [0.005] (1) 16129 [0.002] (1) 16134 [0.007] (0)
16189 [0.003] (1) 16313 [0.003] (2) 16316 [0.94N/0.079] (2) 16336 [0.032] (1)
16342 [0.005] (1) 16350 [0.024] (0) 16359 [0.020] (0) 16363 [0.004] (1)
16395 [0.005] (0) 16446 [0.002] (0) 16516 [0.003] (1) 16522 [0.008] (1)
Donor
16093 [0.013] (2) 16209 [0.92N] (1) 16269 [0.204] (1) 16277 [1.00N/0.194] (0)
16282 [0.043] (2) 16451 [0.044] (0) 16458 [0.014] (1)

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