information on T27D20
(16203..16397)
Direction: +
Frame: 3
ORF
16056..16526 (Met:)
AETAATDAYLINRSPASAVDHNVPEQLWLNREPGYKHLRRFSSIAYVHQEQGKLKPRVLK
GVFLGYPQGTKGYKVWLIDEEKCVISRNVVFNEDSVFKDLQSGSKDEDETVTQESQIEIE
TPPKSELETQNQVQGGATQVQLNDSEDEYNDVEGVVT
GenBank annotation
14338..18209 T27D20.5
BLASTX cluster
None
BLASTN cluster
None
GENSCAN
14338..17984 gene model 4
Suboptimal exon
16094..16526 Term Phase: 2 Score: 0.538
Grail
16069..16282 exon Phase: 1 Score: 49
16342..16529 exon Phase: 1 Score: 82
Exon-Intron boundary candidatates
Acceptor |
16094 [0.708] (2) |
16111 [0.005] (1) |
16129 [0.002] (1) |
16134 [0.007] (0) |
16189 [0.003] (1) |
16313 [0.003] (2) |
16316 [0.94N/0.079] (2) |
16336 [0.032] (1) |
16342 [0.005] (1) |
16350 [0.024] (0) |
16359 [0.020] (0) |
16363 [0.004] (1) |
16395 [0.005] (0) |
16446 [0.002] (0) |
16516 [0.003] (1) |
16522 [0.008] (1) |
Donor |
16093 [0.013] (2) |
16209 [0.92N] (1) |
16269 [0.204] (1) |
16277 [1.00N/0.194] (0) |
16282 [0.043] (2) |
16451 [0.044] (0) |
16458 [0.014] (1) |
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