information on T27D20    (12870..12652)

Direction: -

Frame: 2

ORF

    12993..12397  (Met: 12888 12714 12690 12633)
CSKLTHASSHNTSLEHGESHSQISQRSSGSRHLDGMNRNTEIVGYCDADYAGDQQDRRST
TGYCTFIGGNLVTWRSKKQKVVSLSSAEAEYRAMRKLTTELMWLKALLKDFGIDTPNPIP
MHCDNQAAIHIASNSVFHERTKHIEVDCHKVREQVQLGVILPHYTESEEQLVDVFTKGAS
TKVCEYIHNKLGVVDLTRP

GenBank annotation

    13861..12394    T27D20.7

BLASTX cluster

    18206..11436    cluster 2    83 hits for protein gene

BLASTN cluster

    None

GENSCAN

    14159..9109    gene model 3
    6870..6096    gene model 2
    Suboptimal exon

        12988..12448    Intr    Phase: 2    Score: 0.501

Grail

    12988..12394    exon    Phase: 2    Score: 87

Exon-Intron boundary candidatates

Acceptor
12400 [0.010] (2) 12554 [0.002] (1) 12916 [0.004] (2) 12984 [0.001] (0)
12988 [0.87N/0.017] (2)
Donor
12448 [0.95N/0.806] (0) 12544 [0.022] (0) 12990 [0.014] (1)

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