information on T27D20    (79928..79171)

Direction: -

Frame: 2

ORF

    80100..79174  (Met: 79638 79599)
ILRPERTLKVIHNLRGPSQVQTRRKRRRCLSPFRRTLERTSFGLVLKTRGKFRGQFSGAI
DALPKAIFDANRSTSDADLWSLSQQPNEPLRDFLAKFRSTLAKVEGINDVAALSALKKAL
CYKSEFRKELNLSKPQTIRDALHRASDYVSHEEEMELLSKRHEPPKQMPRSDKSQFRSPN
HKKGAQDGTFIHHEGRNFSEAHNYQADTPRGRGRGRGRGRGRESYTWTNDQPARNEQEYC
ELHKSYGHHTSRCRSLGAKLAAKFLVGEIGGGLTIGDLETEKAKTEQVYAVANPEQAAPA
ANLEGSKRG

GenBank annotation

    80255..79171    T27D20.18

BLASTX cluster

    80273..75168    cluster 17    61 hits for protein gene
    80444..79033    cluster 18    1 hits for protein gene

BLASTN cluster

    None

GENSCAN

    80389..75165    gene model 16

Grail


    None

Exon-Intron boundary candidatates

Acceptor
79212 [0.009] (0) 79239 [0.034] (0) 79254 [0.005] (0) 79274 [0.019] (1)
79336 [0.009] (2) 79345 [0.003] (2) 79484 [0.014] (1) 79499 [0.002] (1)
79517 [0.001] (1) 79570 [0.013] (2) 79588 [0.001] (2) 79716 [0.003] (0)
79845 [0.028] (0) 79848 [0.011] (0) 79874 [0.003] (1) 79928 [0.037] (1)
79935 [0.002] (0) 80103 [0.011] (0)
Donor
79240 [0.005] (0) 79383 [0.056] (1) 79862 [0.006] (2) 79880 [0.009] (2)
80018 [0.076] (2)

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Entrance