information on T27D20
(41442..41817)
Direction: +
Frame: 3
ORF
41379..41930 (Met: 41442 41598 41664 41691 41883)
QVTVSFSVGKYHDQVVCDVVPMRVGHLLLGRPWQFDRATCHNRRTNHYSFTYNDRKYNLA
PLSPLEVHDLQIHMNKEHEVRSSSLYLSSKDVCKTMSAKGTVLLMVFKECLSTGIGDPEL
SAEVQVVLHWYKDLFPEEIPPGLPPIRGIEQQIDLVPGSALPNKPAYRMNPEESKELEKQ
VSDL
GenBank annotation
41442..42505 T27D20.2
BLASTX cluster
40570..43464 cluster 7 45 hits for protein gene
BLASTN cluster
None
GENSCAN
40052..46670 gene model 9
Suboptimal exon
41383..41541 Intr Phase: 1 Score: 0.200
41575..41918 Intr Phase: 1 Score: 0.139
Grail
41399..41615 exon Phase: 2 Score: 62
41664..41918 exon Phase: 0 Score: 83
Exon-Intron boundary candidatates
Acceptor |
41437 [0.003] (1) |
41642 [0.003] (2) |
41650 [0.002] (1) |
41676 [0.002] (0) |
41719 [0.410] (1) |
41725 [0.005] (1) |
41851 [0.147] (1) |
41882 [0.002] (2) |
Donor |
41541 [1.00N/0.477] (1) |
41615 [1.00N/0.985] (0) |
41724 [0.022] (1) |
41918 [0.128] (0) |
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Entrance