information on T27D20
(80389..80074)
Direction: -
Frame: 3
ORF
80393..79800 (Met: 80255 80234 79895 79841)
AENVEANQIGVSDDEDSKENVRWAEEYAREQEISAIKLSLAKAENEMKLVRSQMHNAVSS
APNIDRILEESHNTPFTRTISNTIISDPGKLRIEYFSESSDPKGHLKSFIISVARAKFRP
DERDAGVFHLFVEHLKGPALDWFSRLEGNSVDSFQELSTLFLKQYSMLIDPRQTPIYGHY
LSSQMSHFETSSQNSDLP
GenBank annotation
80255..79171 T27D20.18
BLASTX cluster
80273..75168 cluster 17 61 hits for protein gene
80444..79033 cluster 18 1 hits for protein gene
BLASTN cluster
None
GENSCAN
80389..75165 gene model 16
Grail
None
Exon-Intron boundary candidatates
Acceptor |
79845 [0.028] (2) |
79848 [0.011] (2) |
79874 [0.003] (0) |
79928 [0.037] (0) |
79935 [0.002] (2) |
80103 [0.011] (2) |
80128 [0.007] (1) |
80134 [0.004] (1) |
80221 [0.008] (1) |
80300 [0.003] (0) |
Donor |
79862 [0.006] (1) |
79880 [0.009] (1) |
80018 [0.076] (1) |
80247 [0.003] (0) |
80317 [0.004] (2) |
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Entrance