information on T27D20
(38413..38978)
Direction: +
Frame: 3
ORF
38076..38978 (Met: 38097 38316 38319 38355 38535 38634 38790 38820 38955)
VSKIYTFMDILRGYDTQSATENGRSTCVSLLKNLGKKTHFGEINKTPIRIASYIESHHVI
KRDHDDFTLWHDQLGHPGTTMMQTIIESSYGHSMKSQEIYQGNKRTCVVCSLGKLIIRLS
PSKITKQLPEFLERAQDDICGPIHPPCGPFYYFMVDADINLTSQTVELHPVPHLILHPVP
EVPEGIMTRSKAKQLKKRFNLVVQDILSSLELGVNWFVAPHTGYDLIGEQELVEAFTQMS
LERTTPPSMKYHLTGSRTSRNQEKTLELQETNDSSVTSASDRESQDQEQDIKDMEELEDV
D
GenBank annotation
None
BLASTX cluster
None
BLASTN cluster
None
GENSCAN
33019..38978 gene model 8
Suboptimal exon
38097..38148 Init Phase: 0 Score: 0.106
38097..38978 Sngl Phase: 0 Score: 0.458
38316..38978 Sngl Phase: 0 Score: 0.132
Grail
38097..38817 exon Phase: 0 Score: 75
Exon-Intron boundary candidatates
| Acceptor |
| 38261 [0.002] (2) |
38295 [0.004] (0) |
38308 [0.002] (1) |
38413 [0.019] (1) |
| 38429 [0.001] (2) |
38464 [0.023] (1) |
38617 [0.011] (1) |
38707 [0.005] (1) |
| 38713 [0.013] (1) |
38731 [0.001] (1) |
38758 [0.021] (1) |
38839 [0.69N/0.783] (1) |
| 38846 [0.004] (2) |
| Donor |
| 38148 [0.008] (1) |
38628 [0.026] (1) |
38668 [0.065] (2) |
38722 [0.013] (2) |
| 38817 [0.058] (1) |
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Entrance