information on T27D20
(33019..33526)
Direction: +
Frame: 1
ORF
32893..33528 (Met: 33019 33076 33223)
RTLKSLKDCFDHKRGITLPLVREEWQSLRFQDFDKVINYNSAMLGIVAKLRYCGETITES
QMLEKTYTTFHKNQITLQQQYRLRGYTKFSDLIVELLIAEKNSELLIKNHMSRPTGSKTF
PEVNALDVKNPVRENKTFWERGCRSYRGHGRGFNQQTRKSYQWIRLEHDSKGKEIQANTS
QKYESACFRCGTCGCRNPQLGSCGCYEDLKPC
GenBank annotation
None
BLASTX cluster
None
BLASTN cluster
None
GENSCAN
33019..38978 gene model 8
Suboptimal exon
33019..33528 Sngl Phase: 0 Score: 0.336
Grail
33188..33531 exon Phase: 1 Score: 60
Exon-Intron boundary candidatates
Acceptor |
32915 [0.001] (1) |
32934 [0.94N/0.396] (2) |
33138 [0.005] (2) |
33164 [0.003] (1) |
33188 [0.016] (1) |
33287 [0.008] (1) |
33459 [0.080] (2) |
Donor |
32978 [0.212] (2) |
32997 [1.00N/0.705] (0) |
33258 [0.85N/0.227] (0) |
33285 [0.058] (0) |
33347 [0.006] (2) |
33526 [0.014] (1) |
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Entrance