information on T27D20    (33019..33526)

Direction: +

Frame: 1

ORF

    32893..33528  (Met: 33019 33076 33223)
RTLKSLKDCFDHKRGITLPLVREEWQSLRFQDFDKVINYNSAMLGIVAKLRYCGETITES
QMLEKTYTTFHKNQITLQQQYRLRGYTKFSDLIVELLIAEKNSELLIKNHMSRPTGSKTF
PEVNALDVKNPVRENKTFWERGCRSYRGHGRGFNQQTRKSYQWIRLEHDSKGKEIQANTS
QKYESACFRCGTCGCRNPQLGSCGCYEDLKPC

GenBank annotation

    None

BLASTX cluster

    None

BLASTN cluster

    None

GENSCAN

    33019..38978    gene model 8
    Suboptimal exon

        33019..33528    Sngl    Phase: 0    Score: 0.336

Grail

    33188..33531    exon    Phase: 1    Score: 60

Exon-Intron boundary candidatates

Acceptor
32915 [0.001] (1) 32934 [0.94N/0.396] (2) 33138 [0.005] (2) 33164 [0.003] (1)
33188 [0.016] (1) 33287 [0.008] (1) 33459 [0.080] (2)
Donor
32978 [0.212] (2) 32997 [1.00N/0.705] (0) 33258 [0.85N/0.227] (0) 33285 [0.058] (0)
33347 [0.006] (2) 33526 [0.014] (1)

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