BLASTX alignment cluster 13    (73155..76500)

Local alignments in this cluster

gi|1402881|emb|CAA66812|[fasta] (X98130) non-ltr retrotransposon reverse transcriptase-like protein [Arabidopsis thaliana]
Length 893 aa
position (link: detail on the area) subject position direction score
76500..76057 (4..151) - 1270
76038..75301 (155..400) - 785
75333..74170 (394..781) - 1395
74158..73847 (781..884) - 395

gi|3193294[fasta] (AF069298) similar to reverse transcriptases (Pfam: rvt.hmm, score: 53.76) [Arabidopsis thaliana]
Length 657 aa
position (link: detail on the area) subject position direction score
75147..74287 (2..288) - 602
74280..74155 (292..333) - 103
74158..73835 (333..440) - 313
73753..73526 (449..524) - 151
73418..73164 (564..648) - 250

gi|3892061|gb|AAC78274.1|AAC78274[fasta] (AC002330) putative reverse transcriptase [Arabidopsis thaliana]
Length 543 aa
position (link: detail on the area) subject position direction score
75147..74287 (2..288) - 457
74280..74155 (292..333) - 103
74158..73937 (333..406) - 199
73373..73185 (451..513) - 191

gi|3513745[fasta] (AF080118) contains similarity to reverse trancriptase (Pfam: rvt.hmm, score: 42.57) [Arabidopsis thaliana]
Length 1662 aa
position (link: detail on the area) subject position direction score
76110..76051 (507..526) - 105
76011..75703 (539..641) - 108
75498..75244 (704..788) - 134
75186..74764 (805..945) - 281
74742..74464 (955..1047) - 190
74436..74305 (1058..1101) - 70
74158..73667 (1153..1316) - 147
73352..73155 (1362..1427) - 115

gi|2708743[fasta] (AC003952) putative Tal-1-like reverse transcriptase [Arabidopsis thaliana]
Length 1365 aa
position (link: detail on the area) subject position direction score
76005..75679 (159..267) - 70
75468..75268 (331..397) - 115
75159..74779 (431..557) - 270
74739..74467 (573..663) - 197
74442..74305 (673..718) - 71
74158..73994 (770..824) - 71
73954..73652 (838..938) - 138
73352..73158 (1045..1109) - 105

gi|4539357|emb|CAB40051.1|[fasta] (AL049525) putative protein [Arabidopsis thaliana]
Length 1294 aa
position (link: detail on the area) subject position direction score
76110..76051 (487..506) - 67
76011..75703 (519..621) - 108
75498..75244 (684..768) - 134
75186..74764 (785..925) - 281
74742..74464 (935..1027) - 190
74436..74305 (1038..1081) - 70
74158..73679 (1133..1292) - 146

gi|3695376[fasta] (AF096370) contains similarity to Arabidopsis thaliana reverse transcriptase-like proteins [Arabidopsis thaliana]
Length 382 aa
position (link: detail on the area) subject position direction score
74835..74377 (15..167) - 508
74253..74146 (177..212) - 91
74158..73775 (209..336) - 299
73753..73640 (345..382) - 71

gi|4557078|gb|AAD22517.1|AC007045_17[fasta] (AC007045) putative Ta11-1 pol polyprotein, 5' partial [Arabidopsis thaliana]
Length 964 aa
position (link: detail on the area) subject position direction score
75453..75262 (1..64) - 108
75189..74779 (88..224) - 273
74742..74464 (239..331) - 241
74436..74305 (342..385) - 81
74223..74155 (415..437) - 40
74158..73841 (437..542) - 122
73753..73637 (572..610) - 54

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