information on T25K17
(68240..69076)
Direction: +
Frame: 2
ORF
68207..69148 (Met: 68240 68354 68813 68855 68966)
LKVWESRALVHMDRISQLSDDLLLQILSFIPGKDVVATSLLSKRWQSLWMLVSELEYDDS
YHTGDYKSFSQFVYRSLLSNNAPVIKHLHLNLGPDCPAIDIGLWIGFALTRRLRQLKINI
RTSSNDASFSLPSSLYTSDTLETLRLINFVLLDVPSSVCLPSLKVLHLKTVDYEDDASLP
SLLFGCPNLEELFVERHDQDLEMDVTFVVPSLRRLSMIDKNYGQCDRYVIDVPSLKYLNI
TDDAVYDVRQIENMPELVEAHVDITQGVTHKFLRALTSVRQLSLCLSLSEVILLNLFYIL
LFLSIFTLCCCCVY
GenBank annotation
68240..69669 T25K17.150
BLASTX cluster
None
BLASTN cluster
None
GENSCAN
68240..69666 gene model 15
Grail
68354..68603 exon Phase: 0 Score: 58
68898..69076 exon Phase: 1 Score: 86
Exon-Intron boundary candidatates
Acceptor |
68207 [0.004] (0) |
68307 [0.001] (1) |
68338 [0.030] (2) |
68431 [0.80N/0.783] (2) |
68505 [0.003] (1) |
68596 [0.012] (2) |
68608 [0.001] (2) |
68679 [0.71N/0.089] (1) |
68792 [0.001] (0) |
68898 [0.001] (1) |
68915 [0.001] (0) |
68931 [0.86N/0.709] (1) |
68940 [0.017] (1) |
Donor |
68246 [0.015] (1) |
68355 [0.005] (2) |
68373 [0.005] (2) |
68396 [0.92N/0.040] (1) |
68430 [0.077] (2) |
68847 [0.014] (2) |
68879 [0.004] (1) |
69076 [0.88N/0.957] (0) |
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