information on T25K17    (65083..65757)

Direction: +

Frame: 1

ORF

    64915..65802  (Met: 64930 64963)
VSPLTMPVVLLRRSSPMDPTLSSESSILVSCLFPTLLCFRALILSISLKLLLLSILGIWP
ESESFRETPEAKPIPSSWNGKCVGGEDFDPSVHCNRKLIGARFYLRGFEETYGTIDFTRD
PEYRSPRDYLGHGTHTASTAVGSVVRNVSGFFGLGRGTARGGAPLARLAVFKTCWGKDLE
GVCTEADILAAFDDAIHDGVHVISASFGYSPPLSPFFESSADIGAFHAAERGISVVFSTG
NDGPDPGVVQNVAPWAVSVAASTVDRSFPTRIVIDGSFTLTVLPLNPVVRVKLLKD

GenBank annotation

    64518..67571    T25K17.140

BLASTX cluster

    64518..67568    cluster 11    14 hits for protein gene

BLASTN cluster

    None

GENSCAN

    62608..67568    gene model 14
    Suboptimal exon

        65034..65757    Intr    Phase: 2    Score: 0.377

Grail

    65112..65805    exon    Phase: 2    Score: 90

Exon-Intron boundary candidatates

Acceptor
64915 [0.521] (0) 65034 [0.123] (2) 65084 [0.97N/0.806] (1) 65112 [0.644] (2)
65232 [0.074] (2) 65243 [0.002] (1) 65486 [0.072] (1) 65569 [0.001] (0)
65579 [0.017] (1) 65600 [0.007] (1) 65665 [0.026] (0) 65696 [0.022] (1)
65780 [0.001] (1)
Donor
64998 [0.059] (0) 65187 [0.004] (0) 65200 [0.011] (1) 65455 [0.018] (1)
65517 [0.033] (0) 65740 [0.88N/0.043] (1) 65757 [1.00N/0.047] (0) 65778 [0.006] (0)

[help]


Entrance