information on T25K17
(64539..67535)
Direction: +
Frame: 3
ORF
64407..67568 (Met: 64518 64530 64578 65145 65157 65954 66245 66410 66589 66686 66809 66836 66896 67035 67092 67143 67182 67491 64701 64772 64837 65178 65207 65803 65931 66026 66055 66090 66317 66373 66390 66503 66601 66654 67010 67015)
KTLLWLQATTFIFFLKSSQGYLLQNSSLLQSFFSCQSMISSMNFWRCRCSKDDAEQSMLY
SYNNGFLGFSAKLNSTQAASLASNTSIFIFWRQYSSHH*KSVWFWLSLNNELFIGTNKHV
I*EPVPFRSVTLRPVWLTGKLL*LNQVITVFKSKSLKLHTTRSWDFLGLAVDNARRTPPP
QLAYGSDIVVGIFDTGLLFIPDSSLFQGSHFEHFIETFVTFNFRNLAGIGEFQGNAGGET
YTFVMERKMRRRGRL*HLYIAIVN*GARFYLRGFEETYGTIDFTRDPEYRSPRDYLGHGT
HTASTAVGSVVRNVSGFFGLGRGTARGGAPLARLAVFKTCWGKDLEGVCTEADILAAFDD
AIHDGVHVISASFGYSPPLSPFFESSADIGAFHAAERGISVVFSTGNDGPDPGVVQNVAP
WAVSVAASTVDRSFPTRIVIDGSFTLTVLPLNPVVRVKLLKD*LVSLRIRKNKTLNNSIF
QGQSLISQEITGTLALATTYFNGG*AQKSSKMLYSNSIRVTFYTFLEDTCKSVAY*ALVY
NCKD*CAGFANGKTG*KLANETIILCFSTLGPVQFIEEAQAAAIRANALALIFAASPTRQ
LAEEVDMIPTVRVDILHGTRIRNYLARSPT*HIIRLYILFPCAELKNG*KRNS*ILLVKM
KSANGENWTEQNGYRRDYSTLRCIFLFKRT*HYHLIFSRYNHLLFGSFSLLHQVVCLRMQ
LC*YLRYSEFKPEPNLSLY*IVFLVYRWFMQPDITAPGIGILAAWPPRTPPTLLPGDHRS
IEWNFQSGTSMSCPHVAGVMALLQSAHPDWSPSAIRSAIMTTGSISNRPSSYVVLTNPSL
ILLYLISVSSVYKRHKL**LSGGSMKSTDPFDIGAGHINPLKAMDPGLVYNTRTDDYVLF
MCNIGYTDQEIKSMVLHPEPSTTCLPSHSYRTNADFNYPSITIPSLRLTRTIKRTVSNVG
PNKNTVYFVDIIRPVGVEVLIWPRILVFSKCQQEHSYYVTFKPTEIFSGRYVFGEIMWTN
GLHRVRSPVVVFLSNAGFLASS
GenBank annotation
64518..67571 T25K17.140
BLASTX cluster
64518..67568 cluster 11 14 hits for protein gene
BLASTN cluster
None
GENSCAN
62608..67568 gene model 14
49832..45207 gene model 11
Suboptimal exon
64530..64653 Init Phase: 0 Score: 0.552
Grail
64515..64653 exon Phase: 0 Score: 39
64799..65005 exon Phase: 2 Score: 53
65862..65929 exon Phase: 0 Score: 83
66988..67411 exon Phase: 1 Score: 76
Exon-Intron boundary candidatates
| Acceptor |
| 64497 [0.010] (0) |
64515 [0.95N/0.450] (0) |
64544 [0.002] (2) |
64556 [0.009] (2) |
| 64589 [0.063] (2) |
64609 [0.002] (1) |
64618 [0.001] (1) |
64691 [0.001] (2) |
| 64784 [0.005] (2) |
64799 [0.034] (2) |
64840 [0.001] (1) |
64851 [0.87N/0.112] (0) |
| 64915 [0.521] (1) |
65034 [0.123] (0) |
65084 [0.97N/0.806] (2) |
65112 [0.644] (0) |
| 65232 [0.074] (0) |
65243 [0.002] (2) |
65486 [0.072] (2) |
65569 [0.001] (1) |
| 65579 [0.017] (2) |
65600 [0.007] (2) |
65665 [0.026] (1) |
65696 [0.022] (2) |
| 65780 [0.001] (2) |
65822 [0.61N/0.008] (2) |
65862 [1.00N/0.270] (0) |
65868 [0.012] (0) |
| 65883 [0.189] (0) |
66000 [0.046] (0) |
66003 [0.011] (0) |
66021 [0.008] (0) |
| 66029 [0.001] (2) |
66032 [0.063] (2) |
66052 [0.001] (1) |
66067 [0.87N/0.384] (1) |
| 66149 [0.025] (2) |
66162 [0.001] (0) |
66181 [0.002] (1) |
66210 [0.144] (0) |
| 66286 [0.015] (1) |
66292 [0.002] (1) |
66416 [0.94N/0.006] (2) |
66531 [0.001] (0) |
| 66561 [0.007] (0) |
66634 [0.003] (1) |
66692 [1.00N/0.785] (2) |
66696 [0.137] (0) |
| 66705 [0.315] (0) |
66726 [0.004] (0) |
66729 [0.113] (0) |
66765 [0.039] (0) |
| 66855 [0.002] (0) |
66886 [0.004] (1) |
66906 [0.002] (0) |
66922 [0.027] (1) |
| 66988 [1.00N/0.298] (1) |
67121 [0.026] (2) |
67246 [0.003] (1) |
67292 [0.040] (2) |
| 67568 [0.072] (2) |
| Donor |
| 64464 [1.00N/0.312] (1) |
64509 [0.003] (1) |
64653 [0.96N/0.157] (1) |
64765 [0.004] (2) |
| 64812 [0.004] (1) |
64850 [0.023] (0) |
64998 [0.059] (1) |
65187 [0.004] (1) |
| 65200 [0.011] (2) |
65455 [0.018] (2) |
65517 [0.033] (1) |
65740 [0.88N/0.043] (2) |
| 65757 [1.00N/0.047] (1) |
65778 [0.006] (1) |
65892 [0.84N/0.082] (1) |
65914 [0.026] (2) |
| 65929 [0.96N/0.740] (2) |
66046 [0.055] (2) |
66067 [0.004] (2) |
66256 [0.022] (2) |
| 66315 [1.00N/0.379] (1) |
66332 [0.81N] (0) |
66370 [0.021] (2) |
66403 [0.005] (2) |
| 66530 [1.00N/0.618] (0) |
66576 [0.034] (1) |
66618 [0.028] (1) |
66849 [0.006] (1) |
| 66867 [0.068] (1) |
66905 [0.94N/0.275] (0) |
67101 [0.108] (1) |
67307 [0.92N/0.274] (0) |
| 67467 [0.006] (1) |
67471 [0.88N/0.080] (2) |
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