information on T25K17    (47223..47038)

Direction: -

Frame: 1

ORF

    47235..46774  (Met: 47115)
LSSLQVYFESDEVHACIVTCGGLCPGLNTVIREIVSSLSYMYGVKRILGIDVSFCDCNLL
LTKTNTVFICFIFTCLRLFQGGYRGFYAKNTVSLDSKVVNDIHKRGGTILGTSRGGHDTT
KIVDSIQDRGINQVLITITSLHRVLFQEYIQTRS

GenBank annotation

    47695..45204    T25K17.80

BLASTX cluster

    47695..45207    cluster 8    2 hits for protein gene

BLASTN cluster

    None

GENSCAN

    49832..45207    gene model 11
    Suboptimal exon

        46995..46837    Intr    Phase: 0    Score: 0.297
        47220..47134    Intr    Phase: 0    Score: 0.210

Grail

    46995..46771    exon    Phase: 0    Score: 88
    47220..46771    exon    Phase: 0    Score: 81

Exon-Intron boundary candidatates

Acceptor
46916 [0.002] (1) 46943 [0.003] (1) 46984 [0.009] (2) 46995 [0.96N/0.490] (0)
47084 [0.001] (1) 47183 [0.001] (1) 47220 [0.93N/0.909] (0) 47230 [0.010] (2)
Donor
46793 [0.005] (2) 46837 [0.96N/0.021] (0) 47038 [0.026] (0) 47067 [0.007] (1)
47083 [1.00N/0.548] (0) 47114 [0.014] (2) 47134 [0.010] (0) 47149 [0.003] (0)
47172 [0.007] (1) 47221 [0.045] (0)

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