information on T25K17
(47223..47038)
Direction: -
Frame: 1
ORF
47235..46774 (Met: 47115)
LSSLQVYFESDEVHACIVTCGGLCPGLNTVIREIVSSLSYMYGVKRILGIDVSFCDCNLL
LTKTNTVFICFIFTCLRLFQGGYRGFYAKNTVSLDSKVVNDIHKRGGTILGTSRGGHDTT
KIVDSIQDRGINQVLITITSLHRVLFQEYIQTRS
GenBank annotation
47695..45204 T25K17.80
BLASTX cluster
47695..45207 cluster 8 2 hits for protein gene
BLASTN cluster
None
GENSCAN
49832..45207 gene model 11
Suboptimal exon
46995..46837 Intr Phase: 0 Score: 0.297
47220..47134 Intr Phase: 0 Score: 0.210
Grail
46995..46771 exon Phase: 0 Score: 88
47220..46771 exon Phase: 0 Score: 81
Exon-Intron boundary candidatates
Acceptor |
46916 [0.002] (1) |
46943 [0.003] (1) |
46984 [0.009] (2) |
46995 [0.96N/0.490] (0) |
47084 [0.001] (1) |
47183 [0.001] (1) |
47220 [0.93N/0.909] (0) |
47230 [0.010] (2) |
Donor |
46793 [0.005] (2) |
46837 [0.96N/0.021] (0) |
47038 [0.026] (0) |
47067 [0.007] (1) |
47083 [1.00N/0.548] (0) |
47114 [0.014] (2) |
47134 [0.010] (0) |
47149 [0.003] (0) |
47172 [0.007] (1) |
47221 [0.045] (0) |
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