information on T25K17
(33802..34083)
Direction: +
Frame: 1
ORF
33742..34200 (Met: 33751 33760 33766 33865 34039)
LFEMAQMSMTVEKSIKADVTVSHDRVKRAYVTFLAGNKDYWMGVVGLAKGLRKVKSAYPL
VVAILPDVPEEHRQILLAQGCIIREIEPVYPPENKTGYSMAYYVINYSKLRIWEVKNFLT
ICLYLCLFIIRSHRLFFVNVIINYFDCYISLKA
GenBank annotation
33751..35163 T25K17.60
BLASTX cluster
33751..35160 cluster 6 6 hits for protein gene
BLASTN cluster
None
GENSCAN
33751..35160 gene model 8
28504..30660 gene model 6
Suboptimal exon
33760..34083 Init Phase: 0 Score: 0.160
33766..34083 Init Phase: 0 Score: 0.174
Grail
33751..34203 exon Phase: 0 Score: 99
Exon-Intron boundary candidatates
Acceptor |
33751 [0.96N/0.007] (0) |
33781 [0.003] (0) |
33875 [0.001] (1) |
33884 [0.002] (1) |
33979 [0.005] (0) |
34191 [0.002] (2) |
34199 [0.001] (1) |
Donor |
33801 [0.040] (0) |
33814 [0.008] (1) |
33895 [0.037] (1) |
33900 [0.031] (0) |
33991 [0.026] (1) |
34005 [0.013] (0) |
34030 [0.84N/0.085] (1) |
34072 [0.009] (1) |
34083 [1.00N/0.850] (0) |
34158 [0.011] (0) |
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Entrance