information on T25K17
(20538..21035)
Direction: +
Frame: 3
ORF
20133..21053 (Met: 20157 20643 20682 20694 20835 20985 21033)
QIFYFRYLMHCIYRTVYLFHYRFDRDLRWRTGVKIVPIHCDSSNHFQITPEALESAYQTA
RDANIRVRGVLITNPSNPLGATVQKKVLEDLLDFCVRKNIHLVSDEIYSGSVFHASEFTS
VAEIVENIDDVSVKERVHIVYSLSKDLGLPGFRVGTIYSYNDNVVRTARRMSSFTLVSSQ
TQHMLASMLSDEEFTEKYIRINRERLRRRYDTIVEGLKKAGIECLKGNAGLFCWMNLGFL
LEKKTKDGELQLWDVILKELNLNISPGSSCHCSEVGWFRVCFANMSENTLEIALKRIHEF
MDRRRRF
GenBank annotation
19417..21056 T25K17.10
BLASTX cluster
19417..21077 cluster 4 108 hits for protein gene
BLASTN cluster
20294..21298 cluster 5 6 hits for EST
GENSCAN
17335..21053 gene model 4
Grail
20157..21056 exon Phase: 0 Score: 99
Exon-Intron boundary candidatates
Acceptor |
20198 [1.00N/0.995] (2) |
20207 [0.145] (2) |
20216 [0.001] (2) |
20239 [0.005] (1) |
20258 [0.002] (2) |
20274 [0.081] (0) |
20446 [0.023] (1) |
20518 [0.001] (1) |
20558 [0.002] (2) |
20635 [0.014] (1) |
20642 [0.001] (2) |
20673 [0.003] (0) |
20732 [0.002] (2) |
20779 [0.001] (1) |
20794 [0.003] (1) |
20812 [0.001] (1) |
20907 [0.003] (0) |
20969 [0.001] (2) |
21018 [0.001] (0) |
Donor |
20378 [0.010] (0) |
20390 [0.222] (0) |
20417 [0.008] (0) |
20524 [0.055] (2) |
20758 [0.88N/0.133] (2) |
20954 [0.235] (0) |
20962 [0.009] (2) |
20969 [0.84N/0.201] (0) |
21049 [0.113] (2) |
[help]
Entrance