information on T25K17
(46465..46336)
Direction: -
Frame: 3
ORF
46624..46154 (Met: 46351)
EIRRRGLKVAVIGIPKTIDNDIPVCISFYCFVSIEELYFLCGEIENLTFVFVQVIDKSFG
FDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYSGENSLFYFFFALSSSLIRLFHKFV
HCFNRVHSDVCHSSKQRCGLLFDSGVTILPGRRRRTV
GenBank annotation
47695..45204 T25K17.80
BLASTX cluster
47695..45207 cluster 8 2 hits for protein gene
BLASTN cluster
None
GENSCAN
49832..45207 gene model 11
33751..35160 gene model 8
Suboptimal exon
46465..46336 Intr Phase: 0 Score: 0.272
46624..46556 Intr Phase: 0 Score: 0.129
Grail
46465..46151 exon Phase: 0 Score: 89
46624..46151 exon Phase: 0 Score: 75
Exon-Intron boundary candidatates
Acceptor |
46163 [0.003] (2) |
46169 [0.004] (2) |
46216 [0.002] (0) |
46241 [0.013] (2) |
46250 [0.94N/0.885] (2) |
46283 [0.001] (2) |
46401 [0.038] (1) |
46425 [0.002] (1) |
46428 [0.041] (1) |
46458 [0.024] (1) |
46465 [1.00N/0.996] (0) |
46521 [0.005] (1) |
46593 [0.006] (1) |
46613 [0.001] (2) |
46624 [0.98N/0.264] (0) |
Donor |
46336 [1.00N/0.130] (1) |
46372 [0.005] (1) |
46556 [1.00N/0.408] (0) |
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Entrance