information on T25K17
(2449..3489)
Direction: +
Frame: 1
ORF
2443..3489 (Met: 3073 3133 3226 3475)
KQILIGANEKENFREGKDLVGRNRVQGAFQGLYELSHDHGRKDDVLVANLGQPESIRSRL
RSYSRSFAHHDLLKQGLSQTILPTTQNKSDNQTEEKKSDSEEEREVSSDAAEKESNSLPS
ILRLSRSRPQPVSEKHDDIVDESDSASACGVLLEDGTTCTTTPVKGRKRCTEHKGKRLSR
VSPGIHIPCEVPTVRECEETENICGVILPDMIRCRSKPVSRRKRCEDHKGMRVNAFFFLL
NPTERDKAVNEDKSKPETSTGMNQEGSGLLCEATTKNGLPCTRSAPEGSKRCWQHKDKTL
NHGSSENVQSATASQVICGFKLYNGSVCEKSPVKGRKRCEEHKGMRITS
GenBank annotation
None
BLASTX cluster
2443..3489 cluster 1 2 hits for protein gene
BLASTN cluster
None
GENSCAN
60..3489 gene model 1
Grail
2449..2785 exon Phase: 0 Score: 87
Shadow exon
3087..3492 exon Phase: 2 Score: 58
Exon-Intron boundary candidatates
| Acceptor |
| 2449 [0.97N/0.236] (0) |
2459 [0.018] (1) |
2470 [0.61N] (0) |
2473 [0.53N] (0) |
| 2484 [0.012] (2) |
2508 [0.003] (2) |
2514 [0.032] (2) |
2637 [0.001] (2) |
| 2668 [0.61N/0.121] (0) |
2701 [0.83N/0.010] (0) |
2811 [0.003] (2) |
2903 [0.004] (1) |
| 2906 [0.013] (1) |
2933 [0.003] (1) |
2957 [0.002] (1) |
2966 [0.001] (1) |
| 3087 [0.86N/0.142] (2) |
3105 [0.002] (2) |
3173 [0.004] (1) |
3224 [0.009] (1) |
| 3260 [0.005] (1) |
3325 [0.002] (0) |
3370 [0.002] (0) |
3406 [0.004] (0) |
| 3422 [0.006] (1) |
3440 [0.004] (1) |
| Donor |
| 2533 [0.040] (1) |
2537 [0.028] (2) |
2624 [0.004] (2) |
2668 [0.016] (1) |
| 2757 [0.805] (0) |
2785 [0.016] (1) |
3005 [0.007] (2) |
3021 [0.99N/0.657] (0) |
| 3031 [0.004] (1) |
3238 [0.071] (1) |
3244 [0.026] (1) |
3368 [0.006] (2) |
| 3387 [0.086] (0) |
3457 [0.006] (1) |
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Entrance