information on T10M13    (94216..95505)

Direction: +

Frame: 1

ORF

    93604..95613  (Met: 93637 93682 94321 94885 95050 95140 95167 95182 95341 95428 95527)
FRSNFSSSKSTMDSEGVLLRLIHEHSMIPCNHLRKGDCCGRFEAISDGYYCKTCDFFVHK
KCVDEASESIEHPSHPGHTLQLLSKQKYRYCNLCGRDIKDLCYHFGNFDVDLYCAKYPPP
EVIESSETPCHKRTLLKEKIEFHCDAKCEEIGYGFPYKCLECGLTFHIDCVLHPSGVKHL
PEVIHPLDVKNHSCHPLHPLKLVLTGQLPDYSDGKCRLCEKKIDSPLFYHCSPCNFTLDM
RCALNPPSISFEDSKTHDHQLTLLPRLDSFTCNACGLKGDRSPYICVQCNFIIHQECLTL
PRLININRHDHRVARTNLLGLVYSVCGVCRQKVDWTWGGYSCQRCSNYVVHSKCATRKDV
WNGKELEGVIEETEDIEPYVVIDDNTIQHFSHEEHYLKLDDNGVLCDENKRCSACTHSVC
LESFYGCMDCDFILHQNCAKFPKRKRHVLHNERLTLFTREAGHFWCNVCGRISNGFSYQY
GDMKLDVICCSVLEPFVHPSHPDHPLYYISPEMEEVCNGCNMSGTRMLRCIEDGCGFVLC
FKCATLPRVLKHRVDDYPLLLCYGEKANGIYWCEICEKKMNPEKWFYTCKDQWASLHTEC
VVGDFSGLMPGSVVKAETGSYEVVLNKNVSRPFCRQCKSHCMYPIIYKIPETSVSYLCSD
ICIKRFTKRD

GenBank annotation

    93637..95616    T10M13.18

BLASTX cluster

    86915..95613    cluster 12    27 hits for protein gene

BLASTN cluster

    None

GENSCAN

    93637..95613    gene model 18
    Suboptimal exon

        93637..95189    Init    Phase: 0    Score: 0.112

Grail


    None

Exon-Intron boundary candidatates

Acceptor
93609 [0.001] (2) 93734 [0.002] (1) 93891 [0.012] (2) 93952 [0.001] (0)
94220 [0.158] (1) 94438 [0.007] (0) 94635 [0.004] (2) 94751 [0.010] (1)
94935 [0.003] (2) 95016 [0.001] (2) 95034 [0.004] (2) 95060 [0.001] (1)
95078 [0.90N/0.095] (1) 95138 [0.024] (1) 95190 [0.001] (2) 95351 [0.007] (1)
95375 [0.007] (1) 95399 [0.014] (1) 95408 [0.015] (1) 95423 [0.064] (1)
95435 [0.006] (1) 95508 [0.060] (2) 95512 [0.004] (0)
Donor
93691 [0.004] (1) 93709 [0.122] (1) 93832 [0.90N/0.064] (1) 93853 [0.90N/0.045] (1)
93874 [0.028] (1) 93966 [0.015] (0) 94045 [0.095] (1) 94149 [0.92N/0.053] (0)
94167 [0.81N/0.019] (0) 94219 [0.235] (1) 94303 [0.003] (1) 94417 [0.005] (1)
94468 [0.74N/0.055] (1) 94618 [0.235] (1) 94634 [0.018] (2) 94736 [0.041] (2)
94743 [0.011] (0) 94879 [0.015] (1) 94882 [0.063] (1) 94987 [0.084] (1)
94999 [0.004] (1) 95189 [0.286] (2) 95308 [0.098] (1) 95469 [0.004] (0)
95512 [0.98N/0.422] (1) 95528 [0.74N/0.003] (2)

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