information on T10M13    (1974..2126)

Direction: +

Frame: 3

ORF

    1182..2165  (Met: 1224 1362 1614 1713 1740 1758 2076 2130)
KRNRNLVIFFVNLNMTSLTIDLLSVLRREPWLYNNWFVTTHRWEVNLTFHLLTSIELWVQ
MRGIPLLYVCEETALEIAHELGKILTLDFHDSTTTQIAYIRVRIRFGITDRLRFFQRIIF
DFGEAALISFQYERLRRICSSCFRMTHHRNSCPYRQIEPLHRVTNSTAQRNVREEVFMRD
ENLRSSMNSQSQMSESSFPTPIDPPPRIPHPPLNPDELVAAYYPHTRATSLPNFAGPLPQ
VPLRKNVDERDSNIQPFSGPAFAAHSPRLVEVGESSRQGENTQNVHTVEKGDSSKRKNMG
GPRFKDDARKSNEDEHMNGGILKPPKKR

GenBank annotation

    1224..2168    T10M13.1

BLASTX cluster

    1239..2126    cluster 1    2 hits for protein gene

BLASTN cluster

    None

GENSCAN

    1614..2165    gene model 2

Grail


    None

Exon-Intron boundary candidatates

Acceptor
1255 [0.61N/0.012] (1) 1265 [0.001] (2) 1307 [0.001] (2) 1362 [0.036] (0)
1414 [0.001] (1) 1426 [0.002] (1) 1510 [0.037] (1) 1575 [0.76N/0.008] (0)
1583 [0.001] (2) 1589 [0.008] (2) 1601 [0.001] (2) 1604 [0.004] (2)
1613 [0.012] (2) 1628 [0.098] (2) 1650 [0.002] (0) 1667 [0.003] (2)
1758 [0.028] (0) 1888 [0.189] (1) 1902 [0.011] (0) 1972 [0.018] (1)
1999 [0.030] (1)
Donor
1288 [0.054] (2) 1313 [1.00N/0.888] (0) 1484 [0.007] (0) 1495 [0.74N/0.054] (2)
1519 [0.085] (2) 1644 [0.004] (1) 1667 [0.007] (0) 1694 [0.021] (0)
1706 [0.021] (0) 1887 [0.047] (1) 1901 [0.576] (0) 1994 [0.015] (0)
1998 [0.120] (1) 2016 [0.619] (1) 2089 [0.057] (2)

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