information on T10M13    (10105..10233)

Direction: +

Frame: 1

ORF

    9985..10554  (Met: 10282)
LLVLVLSKNLIAYSFLSVKPRNLDAGSFGGSLPHPASTRFLSYEELKEATSNFESASILG
EGGFGKVYRGILADGTAVAIKKLTSGGPQGDKEFQVEIDMLSRLHHRNLVKLVGYYSSRD
SSQHLLCYELVPNGSLEAWLHGNISSLLPLLPIFRSDIVKSSYCTLSSSTRVVYLSHCLC
FRASRVELSS

GenBank annotation

    8320..11487    T10M13.2

BLASTX cluster

    10057..11382    cluster 2    15 hits for protein gene

BLASTN cluster

    9461..11668    cluster 1    4 hits for EST

GENSCAN

    8320..11484    gene model 3
    Suboptimal exon

        10037..10168    Intr    Phase: 1    Score: 0.116
        10220..10408    Intr    Phase: 1    Score: 0.121

Grail


    None

Exon-Intron boundary candidatates

Acceptor
10005 [0.010] (2) 10037 [0.666] (1) 10047 [0.002] (2) 10155 [0.003] (2)
10163 [0.016] (1) 10169 [0.022] (1) 10183 [0.003] (0) 10191 [0.058] (2)
10220 [0.001] (1) 10231 [0.001] (0) 10270 [0.005] (0) 10338 [0.002] (2)
10354 [0.012] (0) 10389 [0.010] (2) 10449 [0.026] (2) 10530 [0.96N/0.788] (2)
Donor
10093 [0.013] (1) 10100 [0.016] (2) 10168 [0.053] (1) 10182 [0.006] (0)
10207 [0.006] (1) 10252 [0.220] (1) 10269 [0.044] (0) 10303 [0.007] (1)
10408 [1.00N/0.412] (1)

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