information on T10I14    (46488..45712)

Direction: -

Frame: 3

ORF

    46548..45706  (Met: 46488 46401 46338 45948 45918)
STQRVKFLCISASLSLLSVEMAGRIQSHQLPNGLYVSGKLEQPKERPPTMAARAVPYTGG
DIKKSGELGRMFDISVVDSASFQGPPPLIVGGNSSGGTSRLQAPPRVSGSSSNPNSGSVR
SGPNSGSVKKFSGPLSQLQPTGLITSGSLGSSGPILSGSRRSGQLDHQLSNLASSKPKYG
SSVTSLNVDPVRVGFKVPKAMVWAVLIVAAMGLLVGAFLTVAVKKPVVIAAVLAAVCPAI
VVLVWNCVWRRKGLLSFIKKYPDAELRGAIDGQFVKVTGVS

GenBank annotation

    46488..39821    T10I14.120

BLASTX cluster

    46488..43960    cluster 10    1 hits for protein gene

BLASTN cluster

    39527..64928    cluster 6    20 hits for EST

GENSCAN

    51813..39824    gene model 10

    Suboptimal exon

        46488..45712    Init    Phase: 0    Score: 0.395

Grail



    None


Exon-Intron boundary candidatates



Acceptor




45713 [0.005] (1)
45761 [0.025] (1)
45791 [0.001] (1)
45842 [0.002] (1)




45845 [0.004] (1)
45926 [0.003] (1)
46031 [0.001] (1)
46066 [0.022] (2)




46069 [0.005] (2)
46151 [0.042] (1)
46242 [0.002] (0)
46264 [0.043] (2)




46267 [0.006] (2)
46298 [0.007] (1)
46415 [0.001] (1)
46490 [0.94N/0.177] (1)




46514 [0.085] (1)




Donor



45712 [1.00N/0.975] (0)
45721 [0.443] (0)
45820 [0.006] (0)
45868 [0.012] (0)



45946 [0.005] (0)
45968 [0.004] (2)
45973 [0.010] (0)
45979 [0.066] (0)



46062 [0.008] (1)
46067 [0.017] (2)
46152 [0.014] (1)
46173 [0.007] (1)



46224 [0.036] (1)
46260 [0.472] (1)
46537 [0.037] (0)










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