information on T10I14    (55354..55001)

Direction: -

Frame: 2

ORF

    55378..54923  (Met: 55354)
INDKRFVVMEGVGARLGRSSTRYGPATVFTGPVRKWKKKWVHVSPSSKKDNNNSSSGSAA
AAASVVNGGSNSDGSNGSHLLLYKWAPLSQNGNGNEDGKSESNSPSEDTVATVAEDPPRR
RFKYVPVSFWFLVQCSCCIGLSYKVFARSLIR

GenBank annotation

    55354..53887    T10I14.150

BLASTX cluster

    None

BLASTN cluster

    39527..64928    cluster 6    20 hits for EST

GENSCAN

    55354..53890    gene model 12
    Suboptimal exon

        55234..55001    Intr    Phase: 0    Score: 0.278
        55354..55283    Init    Phase: 0    Score: 0.302

Grail


    None

Exon-Intron boundary candidatates

Acceptor
54923 [0.058] (2) 54932 [0.001] (2) 54946 [0.003] (0) 55089 [0.001] (1)
55108 [0.004] (0) 55217 [0.003] (2) 55325 [0.577] (2) 55329 [0.223] (1)
55344 [0.002] (1) 55347 [0.512] (1) 55381 [0.94N/0.288] (0)
Donor
54924 [0.039] (2) 54947 [0.019] (0) 54990 [0.033] (2) 55001 [1.00N/0.986] (0)
55087 [0.008] (1) 55156 [0.007] (1) 55159 [0.028] (1) 55174 [0.047] (1)
55177 [0.008] (1) 55259 [0.220] (0) 55263 [0.006] (2) 55283 [0.108] (0)
55314 [0.009] (2) 55330 [0.041] (1)

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