information on L73G19
(5435..6901)
Direction: +
Frame: 2
ORF
5177..6934 (Met: 5189 5198 5210 5432 5641 5840 5901 6068 6134 6146 6343 6494 6733 6902 5579 5587 5595 5624 5686 5763 5843 5857 5925 6005 6031 6063 6302 6361 6369 6515 6544 6570 6725 6802 6807)
WLGFMLNMESLMNGLLCSGSGGGFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDR
GGRGRGRGPPRGGARGGRGPAGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPG
EAVYNEKRISVQVL*D*N*DGLYLHSF*NLFLMVLVIESAERRWNQD*TEFGILSVRSWL
LLFLVVLITSGL*ISLCESYCCCLRDLVHILIVVPVSM*TWC*FYTLVLLLEPQSLMCLI
LLAL*RTRPLCCDYQVLDVYWSFLYIAFVI*GGVCVRG*FLIEVVEIW*MAKKRTNVIPI
IEDARHPAKYRMLVGMVDVIFSDVAQPDQVCFFCLTHNECLNICLKKLDPIPLYVSFALK
WCFDNCK*ILLGFPFRSLWVMQSPSF*Y*ILVFVFVKLNLILLCTCFTISFLRTILNLNV
YYCSVLVLLMLNLLVF*AIQLVGCF*YFILFCL*FSVPFKTVQARILALNASYFLKSGGH
FVISIKVGSNRNIYLIHDLSREKD*NMYCLIFAGKLYRLHRSSRSCVPD**KLQQEQFKP
AEQVTLEPFERDHACVVGGYRMPKKPKAATAA
GenBank annotation
4971..6937 L73G19.10
BLASTX cluster
5432..6904 cluster 1 25 hits for protein gene
BLASTN cluster
4914..5460 cluster 1 2 hits for EST
6041..6830 cluster 2 1 hits for EST
GENSCAN
3355..6934 gene model 1
Grail
5198..5581 exon Phase: 0 Score: 95
5666..5761 exon Phase: 0 Score: 89
5846..5968 exon Phase: 0 Score: 89
6011..6187 exon Phase: 0 Score: 89
6602..6670 exon Phase: 0 Score: 60
6755..6937 exon Phase: 0 Score: 90
Exon-Intron boundary candidatates
Acceptor |
5232 [0.96N/0.989] (1) |
5236 [0.025] (2) |
5251 [0.026] (2) |
5260 [0.006] (2) |
5278 [0.003] (2) |
5287 [0.001] (2) |
5329 [0.002] (2) |
5371 [0.004] (2) |
5495 [0.002] (0) |
5573 [0.003] (0) |
5666 [0.97N/0.378] (0) |
5673 [0.002] (1) |
5695 [0.002] (2) |
5846 [0.90N/0.011] (0) |
5960 [0.048] (0) |
6011 [0.96N/0.275] (0) |
6014 [0.002] (0) |
6055 [0.87N/0.002] (2) |
6133 [0.002] (2) |
6144 [0.006] (1) |
6179 [0.001] (0) |
6330 [0.004] (1) |
6398 [0.001] (0) |
6445 [0.003] (2) |
6602 [0.96N/0.646] (0) |
6645 [0.005] (1) |
6671 [0.002] (0) |
6755 [1.00N/0.987] (0) |
6783 [0.002] (1) |
6786 [0.003] (1) |
6800 [0.003] (0) |
6824 [0.013] (0) |
Donor |
5178 [0.009] (2) |
5449 [0.054] (0) |
5495 [0.107] (1) |
5572 [0.93N/0.866] (0) |
5603 [0.74N/0.192] (1) |
5761 [0.96N/0.252] (0) |
5775 [0.008] (2) |
5923 [0.99N/0.726] (0) |
5936 [0.006] (1) |
5948 [0.005] (1) |
5959 [0.069] (0) |
6139 [0.004] (0) |
6148 [0.026] (0) |
6187 [1.00N/0.709] (0) |
6364 [0.040] (0) |
6639 [0.012] (2) |
6670 [1.00N/0.217] (0) |
6674 [0.007] (1) |
6899 [0.091] (1) |
[help]
Entrance