BLASTX alignment cluster 1    (5432..6904)


Local alignments in this cluster

gi|2982266[fasta] (AF051216) probable fibrillarin [Picea mariana]
Length 249 aa

position (link: detail on the area) subject position direction score

5432..5572 (2..48) + 46
5654..5761 (45..80) + 177
5846..5923 (81..106) + 119
6014..6187 (108..165) + 268
6599..6670 (165..188) + 104
6749..6904 (187..238) + 243


gi|544285|sp|P35551|FBRL_SCHPO[fasta] FIBRILLARIN
gi|422056|pir||S33690 fibrillarin - fission yeast (Schizosaccharomyces pombe)
gi|296704|emb|CAA49550| (X69930) fibrillarin [Schizosaccharomyces pombe]
gi|3687500|emb|CAA21168| (AL031788) fibrillarin [Schizosaccharomyces pombe]
Length 305 aa

position (link: detail on the area) subject position direction score

5435..5569 (68..112) + 42
5654..5761 (110..145) + 146
5846..5923 (146..171) + 115
5978..6187 (161..230) + 279
6599..6670 (230..253) + 73
6737..6898 (248..301) + 169


gi|119853|sp|P22087|FBRL_HUMAN[fasta] FIBRILLARIN (34 KD NUCLEOLAR SCLERODERMA ANTIGEN)
gi|182592 (M59849) fibrillarin [Homo sapiens]
gi|4503661|ref|NP_001427.1|pFBL| fibrillarin
Length 321 aa

position (link: detail on the area) subject position direction score

5435..6901 (81..314) + 195
5435..6901 (81..314) + 195
5666..5761 (126..157) + 119
5846..5923 (158..183) + 129
5987..6187 (176..242) + 271
6599..6670 (242..265) + 90


gi|105987|pir||A38712[fasta] fibrillarin - human
gi|31395|emb|CAA39935| (X56597) fibrillarin [Homo sapiens]
Length 321 aa

position (link: detail on the area) subject position direction score

5435..6901 (81..314) + 195
5435..6901 (81..314) + 195
5666..5761 (126..157) + 120
5846..5923 (158..183) + 129
5987..6187 (176..242) + 271
6599..6670 (242..265) + 90


gi|3399667[fasta] (AC005393) FBRL_HUMAN; 34 KD NUCLEOLAR SCLERODERMA ANTIGEN [Homo sapiens]
Length 318 aa

position (link: detail on the area) subject position direction score

5435..5569 (78..122) + 71
5666..5761 (123..154) + 120
5846..5923 (155..180) + 129
5987..6187 (173..239) + 271
6599..6670 (239..262) + 90
6749..6901 (261..311) + 195


gi|544284|sp|P35550|FBRL_MOUSE[fasta] FIBRILLARIN (NUCLEOLAR PROTEIN 1)
gi|481220|pir||S38342 fibrillarin - mouse
gi|296548|emb|CAA80307| (Z22593) fibrillarin [Mus musculus]
Length 327 aa

position (link: detail on the area) subject position direction score

5435..5569 (87..131) + 169
5666..5761 (132..163) + 114
5846..5923 (164..189) + 129
5987..6187 (182..248) + 271
6599..6670 (248..271) + 90
6749..6901 (270..320) + 195


gi|119857|sp|P15646|FBRL_YEAST[fasta] FIBRILLARIN (NUCLEOLAR PROTEIN 1)
gi|101461|pir||S25421 nucleolar protein NOP1 - yeast (Saccharomyces cerevisiae)
gi|172048 (J05230) fibrillarin [Saccharomyces cerevisiae]
gi|683683|emb|CAA88345| (Z48432) nucleolar protein NOP1 (J05230) [Saccharomyces cerevisiae]
gi|1430979|emb|CAA98572| (Z74062) ORF YDL014w [Saccharomyces cerevisiae]
Length 327 aa

position (link: detail on the area) subject position direction score

5435..5572 (81..126) + 141
5678..5761 (137..164) + 119
5849..5923 (166..190) + 114
5978..6205 (180..255) + 262
6599..6670 (249..272) + 70
6737..6898 (267..320) + 180


gi|2833313|sp|Q22053|FBRL_CAEEL[fasta] FIBRILLARIN
gi|3879244|emb|CAB01657| (Z78413) predicted using Genefinder; Similarity to Xenopus fibrillarin protein (SW:FBRL_XENLA); cDNA EST EMBL:D73496 comes from this gene; cDNA EST EMBL:M89444 comes from this gene; cDNA EST EMBL:D70946 comes from this gene; cD...
Length 352 aa

position (link: detail on the area) subject position direction score

5432..5569 (111..156) + 69
5687..5761 (164..188) + 106
5846..5923 (189..214) + 116
6011..6187 (215..273) + 268
6599..6670 (273..296) + 87
6749..6901 (295..345) + 181


gi|119856|sp|P22232|FBRL_XENLA[fasta] FIBRILLARIN
gi|2134062|pir||I51417 fibrillarin - African clawed frog
gi|214144 (M28874) fibrillarin [Xenopus laevis]
Length 323 aa

position (link: detail on the area) subject position direction score

5441..5572 (85..128) + 195
5681..5761 (133..159) + 121
5846..5923 (160..185) + 124
5987..6223 (178..256) + 277
6749..6901 (266..316) + 188


gi|2833328|sp|Q27200|FBRL_TETTH[fasta] FIBRILLARIN
gi|2654298|emb|CAA54924| (X77962) fibrillarin [Tetrahymena thermophila]
Length 294 aa

position (link: detail on the area) subject position direction score

5441..5572 (62..105) + 115
5669..5761 (106..136) + 117
5846..5923 (137..162) + 119
5987..6187 (155..221) + 258
6599..6670 (221..244) + 93
6749..6901 (243..293) + 141


gi|2253105[fasta] (AF007112) fibrillarin [Plasmodium falciparum]
Length 301 aa

position (link: detail on the area) subject position direction score

5447..5569 (72..112) + 114
5681..5755 (118..142) + 103
5846..5920 (145..169) + 109
6011..6187 (171..229) + 258
6599..6670 (229..252) + 85
6749..6901 (251..301) + 154


gi|544283|sp|P35549|FBRL_LEIMA[fasta] FIBRILLARIN
gi|425152 (L26252) fibrillarin [Leishmania major]
Length 297 aa

position (link: detail on the area) subject position direction score

5438..5569 (56..99) + 93
5681..5755 (108..132) + 94
5849..5923 (136..160) + 116
6011..6082 (161..184) + 98
6077..6205 (182..224) + 144
6599..6670 (218..241) + 94
6749..6901 (240..290) + 166


gi|2833323|sp|Q24957|FBRL_GIALA[fasta] FIBRILLARIN
gi|520825 (L28115) fibrillarin [Giardia lamblia]
Length 327 aa

position (link: detail on the area) subject position direction score

5438..5572 (91..135) + 141
5678..5734 (139..157) + 79
5846..5923 (167..192) + 129
6014..6187 (194..251) + 225
6599..6679 (251..277) + 75
6749..6904 (273..324) + 116


gi|4240554[fasta] (AF110181) fibrillarin [Euglena gracilis]
Length 281 aa

position (link: detail on the area) subject position direction score

5435..5506 (36..59) + 204
5501..5572 (59..82) + 76
5681..5752 (92..115) + 113
5849..5923 (120..144) + 124
6014..6223 (146..215) + 236
6749..6901 (225..275) + 167


gi|4321126|gb|AAD15623|[fasta] (AC006950) FBRL_HUMAN ; 34 KD NUCLEOLAR SCLERODERMA ANTIGEN [Homo sapiens] [AA 1- 227]
Length 227 aa

position (link: detail on the area) subject position direction score

5435..5569 (81..125) + 166
5666..5761 (126..157) + 120
5846..5923 (158..183) + 129
5987..6142 (176..227) + 204


gi|1903277|emb|CAA98571|[fasta] (Z74061) ORF YDL014w [Saccharomyces cerevisiae]
Length 154 aa

position (link: detail on the area) subject position direction score

5978..6205 (7..82) + 211
6599..6670 (76..99) + 70
6737..6898 (94..147) + 180


gi|548831|sp|P35553|FLPA_METVO[fasta] FIBRILLARIN-LIKE PRE-RRNA PROCESSING PROTEIN
gi|421710|pir||S34646 fibrillarin-like protein - Methanococcus voltae
gi|394800|emb|CAA52166| (X73988) pre-rRNA processing protein [Methanococcus voltae]
Length 228 aa

position (link: detail on the area) subject position direction score

5516..5572 (25..43) + 36
5684..5746 (45..65) + 80
5846..5914 (71..93) + 85
6020..6187 (99..154) + 138
6599..6679 (154..180) + 72
6749..6892 (176..223) + 89


gi|2622325[fasta] (AE000889) fibrillarin-like pre-rRNA processing protein [Methanobacterium thermoautotrophicum]
Length 224 aa

position (link: detail on the area) subject position direction score

5687..5746 (43..62) + 243
5855..5917 (71..91) + 81
6011..6199 (93..155) + 147
6749..6889 (173..219) + 90


gi|548830|sp|P35552|FLPA_METVA[fasta] FIBRILLARIN-LIKE PRE-RRNA PROCESSING PROTEIN
gi|421708|pir||S34645 fibrillarin-like protein - Methanococcus vannielii
gi|394798|emb|CAA52165| (X73987) pre-rRNA processing protein [Methanococcus vannielii]
Length 230 aa

position (link: detail on the area) subject position direction score

5510..5563 (25..42) + 164
5687..5746 (48..67) + 77
5846..5914 (73..95) + 88
6020..6187 (101..156) + 153
6599..6679 (156..182) + 62
6749..6892 (178..225) + 78


gi|2833541|sp|Q58108|FLPA_METJA[fasta] FIBRILLARIN-LIKE PRE-RRNA PROCESSING PROTEIN
gi|2127901|pir||A64387 fibrillarin-like pre-rRNA processing protein homolog - Methanococcus jannaschii
gi|1591412 (U67516) fibrillarin (fib) [Methanococcus jannaschii]
Length 230 aa

position (link: detail on the area) subject position direction score

5510..5569 (25..44) + 78
5687..5746 (48..67) + 79
5846..5914 (73..95) + 77
6011..6187 (98..156) + 147
6599..6679 (156..182) + 69
6749..6892 (178..225) + 87


gi|2791993|emb|CAA76128|[fasta] (Y16231) fibrillarin [Methanosarcina mazei]
Length 193 aa

position (link: detail on the area) subject position direction score

5477..5572 (10..41) + 120
5687..5749 (44..64) + 62
5846..5917 (68..91) + 98
6011..6187 (93..151) + 164


gi|2996140[fasta] (AF051743) fibrillarin [Picea mariana]
gi|2996142 (AF051744) fibrillarin [Picea mariana]
gi|2996144 (AF051745) fibrillarin [Picea mariana]
Length 76 aa

position (link: detail on the area) subject position direction score

6629..6670 (2..15) + 63
6749..6904 (14..65) + 243


gi|2648447[fasta] (AE000960) fibrillarin (fib) [Archaeoglobus fulgidus]
Length 210 aa

position (link: detail on the area) subject position direction score

5690..5743 (33..50) + 87
5858..5917 (60..79) + 85
6011..6190 (81..140) + 138


gi|4240548[fasta] (AF102879) fibrillarin [Euglena gracilis]
Length 124 aa

position (link: detail on the area) subject position direction score

5501..5572 (59..82) + 76
5681..5752 (92..115) + 113


gi|929566|emb|CAA28903|[fasta] (X05285) fibrillarin [Drosophila melanogaster]
Length 147 aa

position (link: detail on the area) subject position direction score

5435..5536 (113..146) + 68


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