information on F19F18    (84371..85174)

Direction: +

Frame: 2

ORF

    82826..85333  (Met: 82913 82982 83021 83027 83096 83243 83267 83672 83801 83804 83840 83912 84134 84224 84326 84329 84380 84557 84794 84800 84824 85034 85190 84512 84517 84534)
FKHLYDQTKAINEVSVDSVRRKKVTCEEDMGDIVPVTNNTKEGSSSSSIQCPMLTATNYT
FWTIRMTMALKVHKVWETIEEGLDDIDKNNMASALLLQSIPEALTLRVGKLKTAKKIWDA
IKARNLGADRVKDARLQTLMGEFERIKMKETEKIDDFAGRLSELSTKSADLGNDIEEPKL
VKKFLNSLPRKRYIHIIAALEQVLDLNTTSFEDIVGRLKAYEERICDEEDNQDDQGKLLY
ANSEEKSAQNNWNPNKGKSQGGRGYGRGRGRDRFGNAQGNRDMTNVICYRCDKLGHYASD
CPDRLLKLQETQDVKNDDTQKADALMMHEVVFLNEKNVMPNKLEASLDVDNVWYLDNGAS
NHMTGNLAYFGEIDERVTGKVRFGDDSRIDIKGKGSITFIAKNEERKILADVYYIPDLRS
NIVSLGQATESGCDVRMRDDHLTLYDRDGKLLIKATRSRNRLYKVIMEVDDTKCLQLESL
SETTKWHARLGHIGTDNLKRMMQKELVIGIPNIKVEKEMCGSCLLGKQARKPFPQATPYR
ATSILELLHGDLCGPITPSTVA**ISLS*DDYSRYMWSLLLKEKSEAFNKFKSFKACVEQ
ETGATIKTFRTDRGGEFVSQEFQAFCDASGIKRHLTAPYSPQQNGVVERRNRTLMEMTRS
ILKHMSVPNYLWGEAVRHSTYLINRVATRTLVDQTPYKVLKSKKPNVEHLRVFGCIGYAK
AEAVHLRKLDDRSRMLVHLGTEPGSKGYRLLDPTRRKVIVSRDVVFDEEKRWKWNNSEDE
INNVPGMFSLSFEEFGNNGIREEDDITEETEINDGENHDREAEIPTQAIETVEQ

GenBank annotation

    None

BLASTX cluster

    82913..87034    cluster 9    89 hits for protein gene

BLASTN cluster

    None

GENSCAN

    82913..85333    gene model 22

Grail

    83027..84514    exon    Phase: 0    Score: 99
    84557..85336    exon    Phase: 0    Score: 78

Exon-Intron boundary candidatates

Acceptor
82895 [0.001] (0) 83205 [0.001] (1) 83215 [0.008] (2) 83455 [0.003] (2)
83469 [0.038] (1) 83476 [0.029] (2) 83483 [0.002] (0) 83531 [0.002] (0)
83595 [0.001] (1) 83607 [0.002] (1) 83695 [0.039] (2) 84027 [0.003] (1)
84107 [0.130] (0) 84166 [0.001] (2) 84578 [0.008] (0) 84584 [0.002] (0)
84617 [0.017] (0) 84670 [0.003] (2) 84730 [0.025] (2) 84886 [0.147] (2)
84891 [0.001] (1) 84909 [0.002] (1) 84996 [0.013] (1) 85020 [0.002] (1)
85050 [0.001] (1) 85086 [0.006] (1) 85117 [0.010] (2) 85188 [0.046] (1)
85212 [0.014] (1) 85254 [0.011] (1) 85320 [0.001] (1)
Donor
82894 [0.654] (0) 82952 [0.175] (1) 82976 [0.004] (1) 83047 [0.531] (0)
83541 [0.005] (2) 83562 [0.007] (2) 83643 [0.009] (2) 83680 [0.014] (0)
83694 [0.041] (2) 83836 [0.011] (0) 83936 [0.019] (1) 83965 [0.829] (0)
84127 [0.004] (0) 84217 [0.066] (0) 84401 [0.088] (1) 84519 [1.00N/0.841] (2)
84789 [0.004] (2) 84856 [0.011] (0) 84935 [0.103] (1) 85102 [0.100] (0)
85143 [0.008] (2)

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