information on F19F18    (34268..34167)

Direction: -

Frame: 2

ORF

    35285..34116  (Met: 35105 35042 34391 34232 34178 34136)
CFQFPLLSKSARLQKLITTSTSSSNEENQIHHHHHEDEIEIAEIPGGPASFEICAKFCYG
MTVTLNAYNVVAARCAAEFLEMYETVEKGNLVYKIEVFLNSSILQSWKDSIIVLQTTRAL
SPYSEELKLTGRCLDSIASRASIDTSKVEWSYTYSKKKNLDNGLRKPQAVPRDWWVEDLC
DLHIDLYKRALATIEARGNVSADVIGEALHAYAIKRIPGFSKSSSVQVTDFAKYRALADS
IIELIPDEKRSVSSSFLTKLLRASIFLGCDEVAGLKNRVGERLDEANLGDVLLYDVELMQ
SLVEVFLKSRDPREDDVTAKASVAKLVDGYLAEKSRDSDNLPLQKFLSLAEMVSSFPRQS
HDGVYRAIDMFLKVQDLIYRAIDMFPRHVS

GenBank annotation

    35530..33429    F19F18.80

BLASTX cluster

    35648..33774    cluster 4    2 hits for protein gene

BLASTN cluster

    None

GENSCAN

    35648..33432    gene model 9

Grail

    35276..34113    exon    Phase: 0    Score: 90

Exon-Intron boundary candidatates

Acceptor
34125 [0.004] (2) 34208 [0.004] (0) 34250 [0.005] (0) 34253 [0.040] (0)
34291 [0.015] (1) 34378 [0.001] (1) 34385 [0.107] (0) 34452 [0.006] (2)
34468 [0.141] (1) 34471 [0.005] (1) 34581 [0.046] (2) 34604 [0.101] (0)
34630 [0.013] (1) 34638 [0.002] (2) 34681 [0.002] (1) 34821 [0.199] (2)
34901 [0.001] (0) 35003 [0.001] (0) 35074 [0.001] (1) 35158 [0.004] (1)
35198 [0.001] (0) 35243 [0.038] (0) 35256 [0.023] (2) 35276 [0.95N/0.972] (0)
Donor
34167 [1.00N/0.475] (0) 34301 [0.069] (1) 34441 [0.021] (2) 34448 [0.012] (1)
34605 [0.88N/0.314] (0) 34654 [0.039] (2) 34765 [0.196] (2) 34779 [0.006] (0)
35041 [0.117] (2)

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