information on F19F18    (72264..72917)

Direction: +

Frame: 3

ORF

    72180..72914  (Met: 72357 72426 72501 72636 72729 72789)
EKTQSFSLFLQITVSKCGQVHIFVIALQHSVREDLANLIAPLIFRPITRWPFYAFLGGAM
FCLLASSTCHLLSCHSERVSYIMLRLDYAGIAALIATSFYPPVYYSFMCDPFFCNLYLGF
ITILGIATVLVSLLPVFQSPEFRVVRASLFFGMGFSGLAPILHKLIIFWDQPEALHTTGY
EILMGLLYGLGALVYATRIPERWMPGKFDIAGHSHQLFHVLVVAGAFTHYRAGLVYLKWR
DIEGC

GenBank annotation

    71580..72917    F19F18.170

BLASTX cluster

    71580..77145    cluster 7    3 hits for protein gene

BLASTN cluster

    72630..77325    cluster 7    4 hits for EST

GENSCAN

    71580..77067    gene model 19
    49751..51134    gene model 13
    Suboptimal exon

        72213..72348    Intr    Phase: 0    Score: 0.424
        72213..72351    Intr    Phase: 0    Score: 0.121
        72535..72852    Intr    Phase: 1    Score: 0.242
        72715..72852    Intr    Phase: 1    Score: 0.153

Grail

    72213..72714    exon    Phase: 0    Score: 60

Exon-Intron boundary candidatates

Acceptor
72213 [0.78N/0.047] (0) 72264 [0.90N/0.101] (0) 72298 [0.002] (1) 72314 [0.086] (2)
72349 [0.56N/0.576] (1) 72373 [0.116] (1) 72377 [0.001] (2) 72380 [0.076] (2)
72434 [0.003] (2) 72535 [0.006] (1) 72553 [0.012] (1) 72655 [0.001] (1)
72751 [0.025] (1) 72754 [0.001] (1) 72773 [0.159] (2) 72781 [0.003] (1)
72814 [0.027] (1) 72872 [0.001] (2)
Donor
72485 [0.97N/0.054] (0) 72502 [0.74N/0.006] (2) 72611 [0.009] (0) 72714 [0.88N/0.407] (1)
72732 [0.007] (1) 72795 [0.783] (1) 72852 [0.017] (1)

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Entrance