information on F19F18    (30040..30913)

Direction: +

Frame: 2

ORF

    30020..30910  (Met: 30071 30074 30629 30668)
TSFGFCRRQGIGFKLVKMMEEWFRQNGAEYSYIATENDNQASVNLFTGKCGYSEFRTPSI
LVNPVYAHRVNVSRRVTVIKLEPVDAETLYRIRFSTTEFFPRDIDSVLNNKLSLGTFVAV
PRGSCYGSGSGSWPGSAKFLEYPPESWAVLSVWNCKDSFLLEVRGASRLRRVVAKTTRVV
DKTLPFLKLPSIPSVFEPFGLHFMYGIGGEGPRAVKMVKSLCAHAHNLAKAGGCGVVAAE
VAGEDPLRRGIPHWKVLSCDEDLWCIKRLGDDYSDGVVGDWTKSPPGVSIFVDPREF

GenBank annotation

    29281..30913    F19F18.70

BLASTX cluster

    29281..30907    cluster 3    3 hits for protein gene

BLASTN cluster

    None

GENSCAN

    28111..30910    gene model 8

Grail

    30040..30573    exon    Phase: 2    Score: 89
    30668..30892    exon    Phase: 0    Score: 85

Exon-Intron boundary candidatates

Acceptor
30025 [0.002] (2) 30040 [1.00N/0.997] (2) 30043 [0.001] (2) 30048 [0.014] (1)
30062 [0.001] (0) 30071 [0.002] (0) 30504 [0.006] (1) 30507 [0.006] (1)
30645 [0.002] (1) 30651 [0.112] (1) 30710 [0.002] (0) 30714 [0.767] (1)
30821 [0.001] (0) 30897 [0.001] (1)
Donor
30250 [0.005] (0) 30337 [0.008] (0) 30405 [0.004] (2) 30422 [0.053] (1)
30463 [0.004] (0) 30505 [0.003] (0) 30597 [0.011] (2) 30792 [0.009] (2)
30810 [0.004] (2)

[help]


Entrance