information on F19F18    (62220..63812)

Direction: +

Frame: 3

ORF

    62211..63812  (Met: 62220 62394 62802 62835 63138 63141 63162 63183 63300 63531 63633 63729)
KKKMDTLFRLVSLQQQQQSDSIITNQSSLSRTSTTTTGSPQTAYHYNFPQNDVVEECFNF
FMDEEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSG
HHNDPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYG
DTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATF
GHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKF
VNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINC
VGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRW
FRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGF
GAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWRPT

GenBank annotation

    62220..63815    F19F18.140

BLASTX cluster

    None

BLASTN cluster

    None

GENSCAN

    62220..63812    gene model 16

Grail

    63162..63811    exon    Phase: 0    Score: 86

Exon-Intron boundary candidatates

Acceptor
62237 [0.052] (2) 62242 [0.011] (1) 62246 [0.013] (2) 62303 [0.318] (2)
62404 [0.002] (1) 62632 [0.002] (1) 62650 [0.002] (1) 62668 [0.004] (1)
62815 [0.099] (1) 62915 [0.003] (2) 62971 [0.001] (1) 63043 [0.001] (1)
63049 [0.005] (1) 63268 [0.009] (1) 63295 [0.077] (1) 63476 [0.583] (2)
63499 [0.002] (1) 63512 [0.006] (2) 63738 [0.007] (0) 63773 [0.001] (2)
Donor
62700 [0.007] (1) 62743 [0.013] (2) 62837 [0.038] (0) 63420 [0.103] (1)
63448 [0.006] (2) 63526 [0.005] (2) 63646 [0.011] (2) 63661 [0.031] (2)
63674 [0.005] (0) 63686 [0.055] (0) 63717 [0.020] (1) 63782 [0.005] (0)
63785 [0.012] (0) 63795 [0.028] (1) 63811 [0.74N/0.669] (2)

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