information on F19B15    (81031..82242)

Direction: +

Frame: 1

ORF

    80647..82350  (Met: 80755 80902 80998 81106 81658 81709 82087 82183 82186)
NLSYSLESSSRENSFSFPLKIKSFFFFINTIIIITVMCNPSTTTTTTGSENQESRTGLFL
DLFSINSFEPTKRNLRHCENRGSPLMAEAVTEAKSLFTLAFPIAVTALVLYLRSAVSMFF
LGQLGDLELAAGSLAIAFANITGYSVLSGLALGMEPLCSQAFGAHRFKLLSLTLHRTVVF
LLVCCVPISVLWFNVGKISVYLHQDPDIAKLAQTYLIFSLPDLLTNTLLHPIRIYLRAQG
IIHPVTLASLSGAVFHLPANLFLVSYLRLGLTGVAVASSITNIFVVAFLVCYVWASGLHA
PTWTDPTRDCFRGWAPLLRLAGPSCVSVCLEWWWYEIMIVLCGLLVNPRSTVAAMGVLIQ
TTSFLYVFPSSLSFAVSTRVGNELGANRPKTAKLTATVAIVFAAVTGIIAAAFAYSVRNA
WGRIFTGDKEILQLTAAALPILGLCEIGNCPQTVGCGVVRGTARPSTAANVNLGAFYLVG
MPVAVGLGFWAGIGFNGLWVGLLAAQISCAGLMMYVVGTTDWESEAKKAQTLTCAETVEN
DIIKAVVASTIDGECDEAEPLIRITVLY

GenBank annotation

    80755..82353    F19B15.170

BLASTX cluster

    80899..82347    cluster 10    10 hits for protein gene

BLASTN cluster

    None

GENSCAN

    75705..82441    gene model 16
    Suboptimal exon

        80707..81627    Intr    Phase: 0    Score: 0.340
        82178..82303    Intr    Phase: 1    Score: 0.250

Grail

    80666..81180    exon    Phase: 1    Score: 79
    81437..82353    exon    Phase: 1    Score: 90

Exon-Intron boundary candidatates

Acceptor
80666 [0.017] (1) 80707 [0.001] (0) 80847 [0.008] (2) 80889 [0.010] (2)
80909 [0.041] (1) 80921 [0.001] (1) 80945 [0.001] (1) 81098 [0.031] (1)
81128 [0.001] (1) 81345 [0.011] (2) 81365 [0.002] (1) 81437 [0.001] (1)
81765 [0.023] (2) 81783 [0.079] (2) 81866 [0.012] (1) 81875 [0.001] (1)
81896 [0.010] (1) 81900 [0.005] (2) 81974 [0.015] (1) 82003 [0.012] (0)
82148 [0.011] (1) 82165 [0.009] (0) 82178 [0.130] (1) 82208 [0.004] (1)
82231 [0.002] (0) 82279 [0.005] (0) 82301 [0.002] (1)
Donor
81073 [0.74N/0.127] (1) 81180 [0.011] (0) 81192 [0.007] (0) 81378 [0.87N] (0)
81584 [0.008] (2) 81627 [0.102] (0) 81629 [0.005] (2) 81647 [0.309] (2)
81973 [0.004] (1) 82056 [0.007] (0) 82080 [0.009] (0) 82143 [0.013] (0)
82177 [0.006] (1) 82187 [0.005] (2) 82244 [0.053] (2) 82303 [0.74N/0.052] (1)
82341 [0.90N/0.362] (0)

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