information on F19B15
(63047..63418)
Direction: +
Frame: 2
ORF
62339..63469 (Met: 62468 62534 62609 62621 62702 62858 63038 63056 63119 63326)
TRITNPTSLKYFDEKHLRRNSKLRWYTTQLSITTRIHQSPQETMPLLLRRFPSPSVVSSF
FLRRSMASSTISSDIITPSNTKIGWIGTGVMGRSMCGHLIKAGYTVTVFNRTISKAQTLI
DMGANVADSPNSVAEQSDVVFTIVGYPSDVRHVLLDPKSGALSGLRQGGVLVDMTTSEPS
LAEEIAKAASFKNCFSIDAPVSGGDLGAKNGKLSIFAGGDETTVKRLDPLFSLMGKVNFM
GTSGKGQFAKLANQITIASTMLGLVEGLIYAHKAGLDVKKFLEAISTGAAGSKSIDLYGD
RILKRDFDPGFYVNHFVKDLGICLNECQRMGLALPGLALAQQLYLSLKAHGEGDLGTQAL
LLALERLNNVSVQSSDS
GenBank annotation
62468..63472 F19B15.150
BLASTX cluster
62582..63454 cluster 8 2 hits for protein gene
BLASTN cluster
62567..62785 cluster 15 1 hits for EST
GENSCAN
60473..63469 gene model 14
Suboptimal exon
62468..63469 Sngl Phase: 0 Score: 0.516
62534..63469 Sngl Phase: 0 Score: 0.388
Grail
62344..63266 exon Phase: 2 Score: 87
Shadow exon
63323..63445 exon Phase: 0 Score: 89
Exon-Intron boundary candidatates
Acceptor |
62344 [0.442] (2) |
62443 [0.001] (2) |
62462 [0.053] (0) |
62886 [0.052] (1) |
62931 [0.022] (1) |
62946 [0.56N/0.134] (1) |
62958 [0.021] (1) |
63138 [0.001] (1) |
63159 [0.001] (1) |
63225 [0.006] (1) |
63241 [0.002] (2) |
63294 [0.001] (1) |
63300 [0.94N/0.122] (1) |
63323 [0.65N/0.048] (0) |
63351 [0.005] (1) |
63365 [0.007] (0) |
63383 [0.007] (0) |
63396 [0.009] (1) |
Donor |
62412 [0.007] (2) |
62622 [0.003] (2) |
62645 [0.011] (1) |
62843 [0.016] (1) |
62993 [0.025] (1) |
63007 [0.004] (0) |
63074 [0.233] (1) |
63137 [0.168] (1) |
63266 [0.024] (1) |
63395 [0.028] (1) |
63404 [0.009] (1) |
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Entrance