information on F17N18    (80233..80066)

Direction: -

Frame: 1

ORF

    80830..79985  (Met: 80752 80683 80497 80314 80257 80137 80068)
SDISPLLHFLHIFRSISLFFLLFLSFMEFVTETLGKRIHDPYVEETRCLMIPGPIIVGSG
PSGLATAACLKSRDIPSLILERSTCIASLWQHKTYDRLRLHLPKDFCELPLMPFPSSYPT
YPTKQQFVQYLESYAEHFDLKPVFNQTVEEAKFDRRCGLWRVRTTGGKKDETMEYVSRWL
VVATGENAEEVMPEIDGIPDFGGPILHTSSYKSGEIFSEKKILVVGCGNSGMEVCLDLCN
FNALPSLVVRDSVRMNKTLLVNICKNNDRCLISIVLAFSRST

GenBank annotation

    80752..78976    F17N18.150

BLASTX cluster

    80713..79060    cluster 11    4 hits for protein gene

BLASTN cluster

    None

GENSCAN

    80752..78979    gene model 13

Grail

    80314..79982    exon    Phase: 0    Score: 80
    80752..79982    exon    Phase: 0    Score: 72

Exon-Intron boundary candidatates

Acceptor
80007 [0.017] (1) 80121 [0.004] (1) 80154 [0.69N/0.048] (1) 80348 [0.001] (2)
80366 [0.012] (2) 80392 [0.348] (0) 80407 [0.001] (0) 80480 [0.002] (2)
80557 [0.002] (0) 80571 [0.004] (1) 80690 [0.006] (2) 80727 [0.036] (1)
80736 [0.96N/0.984] (1) 80746 [0.022] (0) 80789 [0.001] (2)
Donor
79986 [0.008] (2) 80051 [0.74N] (0) 80075 [0.94N/0.008] (0) 80179 [0.004] (1)
80261 [0.017] (0) 80310 [0.011] (2) 80348 [0.025] (0) 80512 [0.006] (1)
80691 [0.008] (2) 80709 [0.008] (2)

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