information on F17N18
(55781..55548)
Direction: -
Frame: 3
ORF
55997..55533 (Met: 55955 55850 55835 55814 55775 55769 55751 55748 55628 55547)
ELCWHFNNASVTGPMRHPVDSLTWSQIKDKFSKYSTKPRNLRLDFSTDRMNSFSMQKKVL
YMIDVVSQLQHVPTMCMKAGNIMMSLLFPRPTAPHNNIDVYLAPIIDDLNGLWKECIKVY
DSYMKENCTLRTILLWAISDYLALGTLVRCMVKGK
GenBank annotation
None
BLASTX cluster
59666..45709 cluster 9 5 hits for protein gene
BLASTN cluster
None
GENSCAN
63946..55007 gene model 10
Suboptimal exon
55728..55644 Intr Phase: 2 Score: 0.105
Grail
55942..55530 exon Phase: 1 Score: 68
Exon-Intron boundary candidatates
Acceptor |
55537 [0.027] (1) |
55564 [0.86N/0.026] (1) |
55581 [0.001] (2) |
55622 [0.021] (0) |
55728 [0.001] (2) |
55763 [0.135] (0) |
55797 [0.001] (2) |
55829 [0.024] (0) |
55851 [0.005] (2) |
55855 [0.128] (1) |
55997 [0.003] (0) |
Donor |
55557 [0.022] (0) |
55644 [0.85N/0.084] (0) |
55667 [0.031] (1) |
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Entrance