information on F17N18    (55781..55548)

Direction: -

Frame: 3

ORF

    55997..55533  (Met: 55955 55850 55835 55814 55775 55769 55751 55748 55628 55547)
ELCWHFNNASVTGPMRHPVDSLTWSQIKDKFSKYSTKPRNLRLDFSTDRMNSFSMQKKVL
YMIDVVSQLQHVPTMCMKAGNIMMSLLFPRPTAPHNNIDVYLAPIIDDLNGLWKECIKVY
DSYMKENCTLRTILLWAISDYLALGTLVRCMVKGK

GenBank annotation

    None

BLASTX cluster

    59666..45709    cluster 9    5 hits for protein gene

BLASTN cluster

    None

GENSCAN

    63946..55007    gene model 10
    Suboptimal exon

        55728..55644    Intr    Phase: 2    Score: 0.105

Grail

    55942..55530    exon    Phase: 1    Score: 68

Exon-Intron boundary candidatates

Acceptor
55537 [0.027] (1) 55564 [0.86N/0.026] (1) 55581 [0.001] (2) 55622 [0.021] (0)
55728 [0.001] (2) 55763 [0.135] (0) 55797 [0.001] (2) 55829 [0.024] (0)
55851 [0.005] (2) 55855 [0.128] (1) 55997 [0.003] (0)
Donor
55557 [0.022] (0) 55644 [0.85N/0.084] (0) 55667 [0.031] (1)

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Entrance