information on F17N18
(52530..52255)
Direction: -
Frame: 2
ORF
52746..52282 (Met: 52704 52599 52584 52563 52524 52518 52500 52497 52377 52296)
ELCWHFNNASVTGPMRHPVDSLTWSQIKDKFSKYSTKPRNLRLDFSTDRMNSFSMQKKVL
YMIDVVSQLQHVPTMCMKAGNIMMTLLFPRPTAPHNNIDVYLAPIIDDLNGLWKECIKVY
DSYMKENCTLRTILLWAISDYLALGTLVRCMVKGK
GenBank annotation
None
BLASTX cluster
59666..45709 cluster 9 5 hits for protein gene
BLASTN cluster
None
GENSCAN
53588..45962 gene model 9
63946..55007 gene model 10
Suboptimal exon
52477..52393 Intr Phase: 2 Score: 0.148
52477..52416 Intr Phase: 2 Score: 0.119
Grail
52691..52279 exon Phase: 1 Score: 68
Exon-Intron boundary candidatates
| Acceptor |
| 52286 [0.027] (1) |
52313 [0.86N/0.026] (1) |
52330 [0.001] (2) |
52371 [0.021] (0) |
| 52477 [0.001] (2) |
52512 [0.135] (0) |
52546 [0.001] (2) |
52578 [0.024] (0) |
| 52600 [0.005] (2) |
52604 [0.128] (1) |
52746 [0.003] (0) |
| Donor |
| 52306 [0.022] (0) |
52393 [0.81N/0.084] (0) |
52416 [0.031] (1) |
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Entrance