information on F17N18    (38612..38656)

Direction: +

Frame: 2

ORF

    38594..39037  (Met: 38939 39026)
EDLDYFQNGRVSLGDSLYKSITEEWFDPEQFLSTLDLSTEHKVLDVKNRIEASIVIWKRK
LHLKDNKSSWGSAVSLEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQYNKVMLKCY
CFILLFRYDRTNHHLGKILKILVVMNHI

GenBank annotation

    37289..39550    F17N18.130

BLASTX cluster

    37601..39289    cluster 8    3 hits for protein gene

BLASTN cluster

    None

GENSCAN

    37289..39547    gene model 7
    53588..45962    gene model 9
    Suboptimal exon

        38615..38935    Intr    Phase: 0    Score: 0.142

Grail

    38615..38935    exon    Phase: 0    Score: 84

Exon-Intron boundary candidatates

Acceptor
38595 [0.002] (1) 38598 [0.010] (1) 38604 [0.008] (1) 38615 [0.834] (0)
38623 [0.006] (2) 38661 [0.003] (1) 38679 [0.005] (1) 38684 [0.008] (0)
38712 [0.030] (1) 38740 [0.001] (2) 38811 [0.061] (1) 39000 [0.001] (1)
Donor
38623 [0.008] (0) 38667 [0.006] (2) 38888 [0.009] (1) 38935 [1.00N/0.783] (0)
39019 [0.013] (0) 39022 [0.036] (0)

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