information on F17N18    (17407..17240)

Direction: -

Frame: 1

ORF

    17533..17018  (Met: 17461)
FYFTQNLKLLTFFGFRNLEFCTIVMELFNYLIEPDVVVGQQPLDWNSRIRIALGAAKGLE
YLHEKANPPVIYRDFKSSNILLNVDFDAKLSDFGLAKLGSVGDTQNVSSRVVGTYGYCAP
EYHKTGQLTVKSDVYSFGVVLLELITGKRVIDTTRPCHEQNLVTWVSTIFNF

GenBank annotation

    18242..16571    F17N18.80

BLASTX cluster

    18091..16655    cluster 5    127 hits for protein gene

BLASTN cluster

    None

GENSCAN

    26302..12272    gene model 4
    Suboptimal exon

        17418..17039    Intr    Phase: 1    Score: 0.120
        17430..17039    Intr    Phase: 1    Score: 0.144
        17463..17039    Intr    Phase: 1    Score: 0.148

Grail

    17461..17015    exon    Phase: 0    Score: 86

Exon-Intron boundary candidatates

Acceptor
17126 [0.59N/0.002] (2) 17199 [0.001] (1) 17259 [0.94N/0.014] (1) 17280 [0.017] (1)
17373 [0.004] (1) 17418 [0.571] (1) 17421 [0.010] (1) 17430 [0.96N/0.694] (1)
17463 [0.009] (1) 17478 [0.004] (1) 17486 [0.268] (2)
Donor
17035 [0.005] (1) 17039 [1.00N/0.991] (0) 17048 [0.745] (0) 17065 [0.011] (1)
17095 [0.047] (1) 17135 [0.004] (0) 17147 [0.029] (0) 17158 [0.74N/0.298] (1)
17188 [0.006] (1) 17304 [0.003] (2) 17327 [0.96N/0.514] (0)

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