information on F17N18    (15282..15091)

Direction: -

Frame: 2

ORF

    15372..14512  (Met: 15300 15222 14868 14841 14838 14826 14763 14682 14646 14625)
VYKCGPYFSLLLIKNSEEKKHDREMENNPRSSSSLPLAGRVAIVTGATRGMGREIAIHLH
SLGARVTINYVSSSSKAELLVSELNDSSQLKSAIAVKADVSDPDQINNLFDQTEQEFGSK
VHIVVNCAGVLDPKYPSLSETTLEDFDNTFTINTRGSFLCCKEAAKRVMRGGGGRIIMMS
TSMVGGLAPGYGVYAASKAAVETMVKVLAKELKGSRITANCVAPGPVATEMFYAGKSDET
VKMLAGACPMGRIGESKDITEIVGFLAGDGGEWINGQVIRANGGFVV

GenBank annotation

    15300..14509    F17N18.70

BLASTX cluster

    15303..14515    cluster 4    4 hits for protein gene

BLASTN cluster

    15216..14614    cluster 6    2 hits for EST

GENSCAN

    26302..12272    gene model 4
    Suboptimal exon

        15300..14613    Init    Phase: 0    Score: 0.456

Grail

    15300..14509    exon    Phase: 0    Score: 99

Exon-Intron boundary candidatates

Acceptor
14582 [0.005] (1) 14636 [0.193] (1) 14733 [0.010] (0) 14742 [0.001] (0)
14786 [0.016] (1) 14886 [0.005] (0) 14987 [0.320] (1) 15032 [0.003] (1)
15077 [0.049] (1) 15086 [0.008] (1) 15095 [0.014] (1) 15099 [0.003] (0)
15125 [0.021] (1) 15242 [0.004] (1) 15248 [0.030] (1) 15260 [0.006] (1)
15323 [0.116] (1)
Donor
14547 [0.96N/0.005] (1) 14562 [0.007] (1) 14587 [0.005] (0) 14613 [0.069] (1)
14695 [0.006] (0) 14988 [0.084] (1) 15186 [0.005] (1) 15216 [0.003] (1)

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