information on F17N18
(11059..11966)
Direction: +
Frame: 3
ORF
11013..11966 (Met: 11121 11175 11250 11421 11451 11514 11568 11574 11613 11637 11673 11895)
VSVYRSPNFLVCVCSESQGEILGYSDSGLLIEREREMDYQESYRLTFYGILVAFMELAFA
YCLLCVSAFVFITSKLLLFMPCIGYQNSDLCIQKLLFDWPFRIILRVQKLATTNRPSVLH
HQEQEQEQEQEQEEKTMVDKDKNSELMDRVRLLEVAVEQEKVAKAALMVELEQERAASAS
AADEAMAMILRLQADKASLEMEGKQYERMIDEKFAYDEEEMNILKEILFKREREKHFLEK
ELETYKHIDDDQETEDNEKRECDEDGEPIVYDVHVIEDNSQTKVRDDDVAEHKEMKEEEI
VKDHDSVSSPTSSSTHLP
GenBank annotation
11121..11969 F17N18.50
BLASTX cluster
None
BLASTN cluster
11599..12003 cluster 2 1 hits for EST
GENSCAN
8778..11966 gene model 3
26302..12272 gene model 4
Suboptimal exon
11121..11966 Sngl Phase: 0 Score: 0.902
Grail
Shadow exon
11059..11969 exon Phase: 1 Score: 89
Exon-Intron boundary candidatates
| Acceptor |
| 11013 [0.394] (0) |
11027 [0.850] (2) |
11059 [0.97N/0.142] (1) |
11068 [0.006] (1) |
| 11080 [0.002] (1) |
11089 [0.086] (1) |
11095 [0.044] (1) |
11185 [0.001] (1) |
| 11215 [0.040] (1) |
11238 [0.003] (0) |
11318 [0.002] (2) |
11330 [0.002] (2) |
| 11337 [0.006] (0) |
11357 [0.033] (2) |
11459 [0.001] (2) |
11465 [0.004] (2) |
| 11479 [0.008] (1) |
11557 [0.002] (1) |
11585 [0.006] (2) |
11705 [0.273] (2) |
| 11770 [0.009] (1) |
11852 [0.002] (2) |
11856 [0.004] (0) |
11881 [0.003] (1) |
| 11884 [0.032] (1) |
| Donor |
| 11067 [0.145] (1) |
11423 [0.007] (0) |
11821 [0.073] (2) |
11930 [0.74N] (0) |
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Entrance