information on F17I23    (72949..73188)

Direction: +

Frame: 1

ORF

    72322..73611  (Met: 72325 72427 72823 73156 73450)
IMPSIEDELFPSTPGKFKIDRSNRQLHRCFASTSTMFLWALFLIALTASYLSFQSFVDSG
SRYLTASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDN
FNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYAL
ENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLY
AATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRGK
NRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVD
ILEKHLKVKAKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLSYY
GYNTKAKLVH

GenBank annotation

    None

BLASTX cluster

    72514..73599    cluster 10    13 hits for protein gene

BLASTN cluster

    72244..73639    cluster 14    12 hits for EST
    72782..73159    cluster 13    2 hits for EST

GENSCAN

    72325..73611    gene model 15

Grail

    72325..73614    exon    Phase: 0    Score: 99

Exon-Intron boundary candidatates

Acceptor
72338 [0.044] (1) 72341 [0.012] (1) 72486 [0.003] (2) 72504 [0.002] (2)
72550 [0.008] (0) 72723 [0.006] (2) 72761 [0.014] (1) 72852 [0.001] (2)
72888 [0.001] (2) 72929 [0.001] (1) 73119 [0.001] (2) 73149 [0.001] (2)
73179 [0.016] (2) 73193 [0.001] (1) 73283 [0.011] (1) 73423 [0.210] (0)
73430 [0.003] (1) 73457 [0.011] (1)
Donor
72364 [0.057] (1) 72391 [0.018] (1) 72549 [0.582] (0) 72583 [0.013] (1)
72622 [0.004] (1) 72661 [0.012] (1) 72782 [0.005] (2) 72875 [0.051] (2)
73192 [0.93N/0.157] (1) 73227 [0.010] (0) 73321 [0.007] (1) 73377 [0.027] (0)
73514 [0.012] (2) 73544 [0.020] (2) 73553 [0.004] (2) 73565 [0.90N/0.118] (2)
73605 [0.055] (0)

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